format-version: 1.2
date: 08:03:2007 16:59
saved-by: Melissa Haendel
auto-generated-by: OBO-Edit 1.100-beta21
synonymtypedef: PLURAL "PLURAL"
default-namespace: zebrafish_anatomical_ontology
[Term]
id: ZFA:0000000
name: Brachet's cleft
namespace: zebrafish_anatomy
def: "The visible division between epiblast and hypoblast in the gastrula. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-404
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000001
name: Kupffer's vesicle
namespace: zebrafish_anatomy
def: "Small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period. Kimmel et al, 1995. Kupffer's vesicle has been compared to the mouse embryonic node. Drummond et al, 2005." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-406
relationship: develops_from ZFA:0000023 ! forerunner cell group
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000077 ! tail bud
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000003
name: adaxial cell
namespace: zebrafish_anatomy
synonym: "adaxial cells" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-408
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000279 ! segmental plate
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000004
name: anterior axial hypoblast
namespace: zebrafish_anatomy
synonym: "pre-polster" RELATED [ZFIN:ZDB-PUB-051019-5]
xref: ZFIN:ZDB-ANAT-010921-409
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0001378 ! axial hypoblast
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000005
name: artery
namespace: zebrafish_anatomy
synonym: "arterial system" RELATED []
xref: ZFIN:ZDB-ANAT-010921-411
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000006
name: ball
namespace: zebrafish_anatomy
def: "The anterior round region of the yolk cell present after the yolk extension forms during the segmentation period. Kimmel et al, 1995." [ZFIN:curator]
synonym: "yolk ball" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-413
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0000084 ! yolk
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000007
name: blood
namespace: zebrafish_anatomy
def: "A complex mixture of cells suspended in a liquid matrix that delivers nutrients to cells and removes wastes. (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-414
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005023 ! hematopoietic system
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000008
name: brain
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-415
relationship: develops_from ZFA:0000146 ! presumptive brain
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000009
name: cardiac ventricle
namespace: zebrafish_anatomy
def: "One of four heart chambers." [ZFIN:curator]
synonym: "ventricle" RELATED []
xref: ZFIN:ZDB-ANAT-010921-416
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000010
name: cardiovascular system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-417
is_a: ZFA:0001439 ! organ system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000011
name: caudal artery
namespace: zebrafish_anatomy
def: "Extension of the dorsal aorta in the tail. Kimmel et al, 1995." [ZFIN:curator]
synonym: "CA" RELATED []
xref: ZFIN:ZDB-ANAT-010921-418
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001073 ! axial vasculature
relationship: part_of ZFA:0005037 ! tail vasculature
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000012
name: central nervous system
namespace: zebrafish_anatomy
def: "The brain and spinal cord. Kimmel et al, 1995." [ZFIN:curator]
synonym: "cns" RELATED []
xref: ZFIN:ZDB-ANAT-010921-420
relationship: develops_from ZFA:0000061 ! presumptive central nervous system
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000396 ! nervous system
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000013
name: cranial ganglia
namespace: zebrafish_anatomy
synonym: "presumptive cranial ganglia" RELATED []
xref: ZFIN:ZDB-ANAT-010921-422
is_a: ZFA:0000190 ! ganglion
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000014
name: dorsal aorta
namespace: zebrafish_anatomy
def: "Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery. Kimmel et al, 1995." [ZFIN:curator]
synonym: "DA" RELATED []
xref: ZFIN:ZDB-ANAT-010921-424
is_a: ZFA:0000005 ! artery
relationship: develops_from ZFA:0005077 ! vascular cord
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001073 ! axial vasculature
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000015
name: anatomical set
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-1
is_a: ZFA:0100000 ! zebrafish anatomical entity
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000002 ! Cleavage:2-cell
[Term]
id: ZFA:0000016
name: ectoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-427
is_a: ZFA:0001122 ! primary germ layer
relationship: develops_from ZFA:0001376 ! presumptive ectoderm
relationship: end ZFS:0000038 ! Larval:Day 6
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000017
name: endoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-428
is_a: ZFA:0001122 ! primary germ layer
relationship: develops_from ZFA:0000416 ! presumptive endoderm
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000018
name: epiblast
namespace: zebrafish_anatomy
def: "The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-429
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0000111 ! germ ring
relationship: start ZFS:0000018 ! Gastrula:Germ-ring
[Term]
id: ZFA:0000019
name: epiphysis
namespace: zebrafish_anatomy
def: "A circumscribed swelling, includes the pineal primordium that appears late in the segmentation period in the dorsal midline of the diencephalon. Kimmel et al, 1995." [ZFIN:curator]
synonym: "pineal gland" RELATED []
xref: ZFIN:ZDB-ANAT-010921-430
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001127 ! visual system
relationship: part_of ZFA:0001158 ! endocrine system
relationship: part_of ZFA:0001359 ! pineal complex
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000020
name: extraembryonic structure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-431
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000021
name: eye field
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-432
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000570 ! optic primordium
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000022
name: floor plate
namespace: zebrafish_anatomy
synonym: "floorplate" RELATED []
synonym: "fp" RELATED []
xref: ZFIN:ZDB-ANAT-010921-433
relationship: develops_from ZFA:0001218 ! presumptive floor plate
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000023
name: forerunner cell group
namespace: zebrafish_anatomy
def: "A group of cells that migrate at the leading edge of shield during gastrulation but do not involute. At the end of gastrulation, forerunner cells migrate deep into the embryo and organize to form Kuppfer's vesicle. Cooper and D'Amico, 1996." [ZFIN:curator]
synonym: "DFCs" RELATED []
synonym: "dorsal forerunner cells" RELATED []
synonym: "forerunner cells" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-434
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0001126 ! noninvoluting endocytic marginal cell cluster
relationship: end ZFS:0000023 ! Segmentation:1-4 somites
relationship: start ZFS:0000017 ! Gastrula:50%-epiboly
[Term]
id: ZFA:0000024
name: retinal ganglion cell layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-435
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000026
name: hatching gland
namespace: zebrafish_anatomy
def: "A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland. Kimmel et al, 1995." [ZFIN:curator]
synonym: "hgg" RELATED []
xref: ZFIN:ZDB-ANAT-010921-437
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000027
name: paired fin skeleton
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060331-1
is_a: ZFA:0000434 ! skeletal system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000028
name: heart primordium
namespace: zebrafish_anatomy
def: "Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. Stainier 2001." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-439
relationship: develops_from ZFA:0001065 ! lateral mesoderm
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: part_of ZFA:0000010 ! cardiovascular system
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000029
name: hindbrain
namespace: zebrafish_anatomy
def: "The most posterior of the three principal regions of the brain, forming the rhombencephalon and all or most of the metencephalon. Kimmel et al, 1995." [ZFIN:curator]
synonym: "rhombencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-010921-440
relationship: develops_from ZFA:0000569 ! presumptive hindbrain
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000030
name: macula utricle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-441
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000700 ! utricle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000031
name: hypochord
namespace: zebrafish_anatomy
def: "A transient rod-like structure which is endodermally derived and located immediately ventral to the notochord. The hypochord is thought to play a role in positioning the dorsal aorta. Eriksson and Lofberg, 2000." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-442
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0000017 ! endoderm
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000032
name: hypothalamus
namespace: zebrafish_anatomy
def: "A specialized brain region of the ventral diencephalon arising near the end of the segmentation period; the embryonic hypothalamic region will give rise to the posterior pituitary gland as well as a number of brain nuclei. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-443
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000033
name: intermediate cell mass of mesoderm
namespace: zebrafish_anatomy
synonym: "ICM" RELATED []
synonym: "intermediate cell mass of Oellacher" RELATED []
synonym: "posterior intermediate cell mass" RELATED []
xref: ZFIN:ZDB-ANAT-010921-444
relationship: develops_from ZFA:0000121 ! lateral plate mesoderm
relationship: develops_from ZFA:0001201 ! ventral lateral mesoderm
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: part_of ZFA:0005023 ! hematopoietic system
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000034
name: lateral line system
namespace: zebrafish_anatomy
def: "A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "ll" RELATED []
xref: ZFIN:ZDB-ANAT-010921-445
is_a: ZFA:0000282 ! sensory system
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000142 ! peripheral nervous system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000035
name: lens
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-447
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000107 ! eye
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000036
name: liver and biliary system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-449
is_a: ZFA:0001439 ! organ system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000037
name: anatomical structure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-2
is_a: ZFA:0100000 ! zebrafish anatomical entity
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000038
name: margin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-451
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: start ZFS:0000016 ! Blastula:30%-epiboly
[Term]
id: ZFA:0000039
name: median axial vein
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-452
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000040
name: median fin fold
namespace: zebrafish_anatomy
synonym: "median fin" RELATED []
xref: ZFIN:ZDB-ANAT-010921-453
is_a: ZFA:0000108 ! fin
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000041
name: mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-454
is_a: ZFA:0001122 ! primary germ layer
relationship: develops_from ZFA:0001377 ! presumptive mesoderm
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000042
name: midbrain hindbrain boundary
namespace: zebrafish_anatomy
synonym: "isthmus" RELATED []
synonym: "mhb" RELATED []
xref: ZFIN:ZDB-ANAT-010921-455
relationship: develops_from ZFA:0001187 ! presumptive midbrain hindbrain boundary
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000043
name: muscle pioneer somite 1
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 1" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-456
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000963 ! slow muscle cell somite 1
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000044
name: myotome somite 14
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-457
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000726 ! somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000045
name: neural crest
namespace: zebrafish_anatomy
def: "A cell population arising from the dorsolateral aspect of the central nervous system primordium during the segmentation period, and later migrating along stereotyped pathways to give rise to a diverse and well-defined set of cell types including pigment cells, peripheral neurons and glia, and head cartilage. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-458
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001120 ! neuroectoderm
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000046
name: retinal neural layer
namespace: zebrafish_anatomy
synonym: "neuroretina" RELATED []
xref: ZFIN:ZDB-ANAT-010921-459
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000152 ! retina
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000047
name: peripheral olfactory organ
namespace: zebrafish_anatomy
synonym: "nose" RELATED []
xref: ZFIN:ZDB-ANAT-010921-463
relationship: develops_from ZFA:0000048 ! olfactory placode
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001149 ! olfactory system
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000048
name: olfactory placode
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-464
is_a: ZFA:0001309 ! neurogenic placode
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001149 ! olfactory system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000049
name: optic recess
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-465
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000079 ! telencephalon
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000050
name: optic vesicle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-466
relationship: develops_from ZFA:0000570 ! optic primordium
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000107 ! eye
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000051
name: otic vesicle
namespace: zebrafish_anatomy
def: "Epithelial sac present beside the fifth rhombomere; forms the semicircular canals dorsally and the otolith organs ventrally, and houses the acoustico-vestibular sensory epithelia (maculae) of hair cells. Kimmel et al, 1995. (Also see Anatomical Atlas entry for ear by T. Whitfield.)" [ZFIN:curator]
synonym: "otic capsule" RELATED []
synonym: "otocyst" RELATED []
synonym: "ov" RELATED []
xref: ZFIN:ZDB-ANAT-010921-468
relationship: develops_from ZFA:0000138 ! otic placode
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000052
name: dorsal actinotrichia
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-1
is_a: ZFA:0000089 ! actinotrichia
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000102 ! dorsal fin fold
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000053
name: presumptive segmental plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-470
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000054
name: pericardial sac
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-471
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000010 ! cardiovascular system
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000056
name: pharynx
namespace: zebrafish_anatomy
def: "Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-473
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000058
name: polster
namespace: zebrafish_anatomy
def: "The hatching gland rudiment at the time it underlies the forebrain during the early segmentation period. Kimmel et al, 1995." [ZFIN:curator]
synonym: "pillow" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-475
relationship: develops_from ZFA:0000004 ! anterior axial hypoblast
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000060 ! prechordal plate
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000059
name: postoptic commissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-476
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000060
name: prechordal plate
namespace: zebrafish_anatomy
def: "Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-477
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001204 ! axial mesoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000061
name: presumptive central nervous system
namespace: zebrafish_anatomy
synonym: "neurectoderm" RELATED []
synonym: "prospective neuroectoderm" RELATED []
synonym: "prospective vegetal ectoderm" RELATED []
xref: ZFIN:ZDB-ANAT-010921-478
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000062
name: presumptive forebrain
namespace: zebrafish_anatomy
synonym: "presumptive prosencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-010921-479
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0000146 ! presumptive brain
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000063
name: presumptive neural plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-480
relationship: end ZFS:0000020 ! Gastrula:75%-epiboly
relationship: part_of ZFA:0000061 ! presumptive central nervous system
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000064
name: presumptive pigmented epithelium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-481
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000050 ! optic vesicle
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000066
name: proctodeum
namespace: zebrafish_anatomy
def: "An inward fold on the surface of the embryonic ectoderm that develops into part of the anal passage." [ZFIN:curator]
synonym: "anus" RELATED []
xref: ZFIN:ZDB-ANAT-010921-484
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000112 ! gut
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000067
name: pronephric mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-485
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0001206 ! intermediate mesoderm
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000068
name: proneural cluster
namespace: zebrafish_anatomy
synonym: "proneural clusters" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-486
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000061 ! presumptive central nervous system
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000069
name: rhombomere 6
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r6" RELATED []
xref: ZFIN:ZDB-ANAT-010921-487
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001210 ! presumptive rhombomere 6
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000070
name: sensory axons peripheral
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-488
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000282 ! sensory system
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000071
name: shield
namespace: zebrafish_anatomy
synonym: "organizer" RELATED []
synonym: "Spemann Mangold organizer" RELATED []
synonym: "Spemann's organizer" RELATED []
xref: ZFIN:ZDB-ANAT-010921-489
relationship: end ZFS:0000019 ! Gastrula:Shield
relationship: part_of ZFA:0000111 ! germ ring
relationship: start ZFS:0000019 ! Gastrula:Shield
[Term]
id: ZFA:0000072
name: somite 1
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-490
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000073
name: somite 5
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-492
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000074
name: somite 26
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-493
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000075
name: spinal cord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-494
relationship: develops_from ZFA:0001135 ! neural tube
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000076
name: swim bladder
namespace: zebrafish_anatomy
def: "The swim bladder is a double-chambered organ located in the coelom and used to maintain buoyancy and may function as an acoustic resonator. The zebrafish does not appear to have a gas gland, but it is not yet clear if there are gas producing cells distrubuted more widely. Finney et al, 2006." [ZFIN:curator]
synonym: "gas bladder" RELATED []
xref: ZFIN:ZDB-ANAT-010921-495
is_a: ZFA:0000496 ! organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000204 ! esophagus
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000077
name: tail bud
namespace: zebrafish_anatomy
synonym: "tailbud" RELATED []
xref: ZFIN:ZDB-ANAT-010921-496
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000078
name: ventral actinotrichia
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-2
is_a: ZFA:0000089 ! actinotrichia
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001069 ! ventral fin fold
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000079
name: telencephalon
namespace: zebrafish_anatomy
def: "The anterior and dorsal forebrain neuromere, includes the olfactory bulb. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-498
relationship: develops_from ZFA:0000571 ! presumptive telencephalon
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000109 ! forebrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000080
name: trigeminal neural crest
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-499
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0001194 ! cranial neural crest
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000081
name: trunk mesenchyme
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-500
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000393 ! mesenchyme
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000082
name: vein
namespace: zebrafish_anatomy
synonym: "venous system" RELATED []
xref: ZFIN:ZDB-ANAT-010921-501
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000083
name: ventral mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-502
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000084
name: yolk
namespace: zebrafish_anatomy
def: "Nutrient store for embryonic development in the form of semicrystalline phospholipoprotein and contained within yolk granules. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-503
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000085
name: apical ectodermal ridge pectoral fin bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-504
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: part_of ZFA:0000141 ! pectoral fin bud
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000086
name: EVL
namespace: zebrafish_anatomy
def: "Outermost monolayer of cells surrounding the embryo that become very flattened in the blastula and give rise to the periderm. Sometimes used synonymously with periderm. Kimmel et al, 1995." [ZFIN:curator]
synonym: "enveloping layer" RELATED [ZFIN:ZDB-PUB-961014-576]
synonym: "periderm" RELATED []
xref: ZFIN:ZDB-ANAT-010921-505
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0001484 ! superficial blastomere
relationship: end ZFS:0000021 ! Gastrula:90%-epiboly
relationship: part_of ZFA:0001176 ! blastoderm
relationship: start ZFS:0000016 ! Blastula:30%-epiboly
[Term]
id: ZFA:0000088
name: YSL
namespace: zebrafish_anatomy
def: "Peripheral layer of the yolk cell including nuclei and non-yolky cytoplasm. Kimmel et al, 1995." [ZFIN:curator]
synonym: "periblast" RELATED [ZFIN:ZDB-PUB-961014-576]
synonym: "yolk syncytial layer" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-508
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0000084 ! yolk
relationship: develops_from ZFA:0000541 ! marginal blastomere
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: start ZFS:0000011 ! Blastula:1k-cell
[Term]
id: ZFA:0000089
name: actinotrichia
namespace: zebrafish_anatomy
def: "Slender, horny, flexible, unsegmented fibrils which strengthen the embryonic fin fold. Actinotrichia are translucent, exhibit birefringence (double refraction) and are composed of a scleroprotein called elastoidine. http://www.briancoad.com/Dictionary/A.htm" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-3
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000108 ! fin
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000090
name: apical ectodermal ridge dorsal fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-511
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001173 ! dorsal fin
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000091
name: axial chorda mesoderm
namespace: zebrafish_anatomy
synonym: "chordamesoderm" RELATED []
xref: ZFIN:ZDB-ANAT-010921-512
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001204 ! axial mesoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000092
name: axis
namespace: zebrafish_anatomy
synonym: "midline" RELATED []
xref: ZFIN:ZDB-ANAT-010921-513
is_a: ZFA:0001308 ! cardinal organism part
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: start ZFS:0000017 ! Gastrula:50%-epiboly
[Term]
id: ZFA:0000093
name: blastomere
namespace: zebrafish_anatomy
def: "A cell arising during cleavage; the term encompasses the partially cleaved, incomplete cells at the blastodisc margin before they collectively form the yolk syncytial layer (YSL) in the midblastula. Kimmel et al, 1995." [ZFIN:curator]
synonym: "blastomeres" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-514
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000015 ! Blastula:Dome
relationship: part_of ZFA:0001175 ! blastodisc
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000094
name: blood island
namespace: zebrafish_anatomy
def: "Nests of developing blood cells arising late in the segmentation period from the intermediate mass, and located in the anterior-ventral tail, just posterior to the yolk extension. Kimmel et al, 1995." [ZFIN:curator]
synonym: "blood islands" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-515
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000033 ! intermediate cell mass of mesoderm
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000095
name: pharyngeal arch 3-7 skeleton
namespace: zebrafish_anatomy
def: "Skeletal and cartilagenous elements of the gill arches; the last five of the set of seven pharyngeal arches; the numbering system can be confusing; generally branchial arch #1 is the first gill arch, or the third pharyngeal arch, but some authors do not follow this convention. Kimmel et al, 1995." [ZFIN:curator]
synonym: "branchial arches" RELATED []
synonym: "gill arches 1-5" RELATED []
synonym: "visceral arches 3-7" RELATED []
xref: ZFIN:ZDB-ANAT-010921-516
is_a: ZFA:0001216 ! pharyngeal arch skeleton
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000096
name: cardinal system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-517
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000097
name: carotid artery
namespace: zebrafish_anatomy
def: "Artery originating at the junction of the first two aortic arches and supplying the anterior brain. Kimmel et al, 1995." [ZFIN:curator]
synonym: "internal carotid artery" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-518
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000098
name: proliferative region
namespace: zebrafish_anatomy
synonym: "cell cycle" RELATED []
synonym: "cell division" RELATED []
synonym: "proliferation" RELATED []
xref: ZFIN:ZDB-ANAT-010921-520
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000012 ! Blastula:High
[Term]
id: ZFA:0000099
name: brain vasculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-4
is_a: ZFA:0001267 ! cranial vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000100
name: cerebellum
namespace: zebrafish_anatomy
def: "Specialized brain region derived from the dorsal metencephalon (anterior hindbrain, and perhaps including posterior midbrain) and becoming distinctive late in the segmentation period. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-522
relationship: develops_from ZFA:0001442 ! upper rhombic lip
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000029 ! hindbrain
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000101
name: diencephalon
namespace: zebrafish_anatomy
def: "The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis). Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-524
relationship: develops_from ZFA:0000574 ! presumptive diencephalon
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000109 ! forebrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000102
name: dorsal fin fold
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-525
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000040 ! median fin fold
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000103
name: embryo
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-528
is_obsolete: true
[Term]
id: ZFA:0000104
name: lateral cells
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-529
is_obsolete: true
[Term]
id: ZFA:0000105
name: epidermis
namespace: zebrafish_anatomy
def: "A cellular, multilayered epithelium derived from the ectoderm. Zebrafish epidermis consists only of living cells unlike terrestrial vertebrates in which dead, keratinized cells are present. Le Guellec et al, 2004." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-530
relationship: develops_from ZFA:0000016 ! ectoderm
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000368 ! integument
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000106
name: extension
namespace: zebrafish_anatomy
def: "The posterior elongated region of the yolk cell that forms during the segmentation period. Kimmel et al, 1995." [ZFIN:curator]
synonym: "yolk extension" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-531
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0000084 ! yolk
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000107
name: eye
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-532
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001114 ! head
relationship: part_of ZFA:0001127 ! visual system
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000108
name: fin
namespace: zebrafish_anatomy
synonym: "fins" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-533
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000109
name: forebrain
namespace: zebrafish_anatomy
def: "The most anterior region the brain including both the telencephalon and diencephalon. Kimmel et al, 1995." [ZFIN:curator]
synonym: "prosencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-010921-534
relationship: develops_from ZFA:0000062 ! presumptive forebrain
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000110
name: fourth ventricle
namespace: zebrafish_anatomy
def: "Fluid-filled brain cavity. Kimmel et al, 1995." [ZFIN:curator]
synonym: "4th ventricle" RELATED []
synonym: "hindbrain ventricle" RELATED []
synonym: "rhombencephalic ventricle" RELATED []
synonym: "rhombencephalic vesicle" RELATED []
xref: ZFIN:ZDB-ANAT-010921-535
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000029 ! hindbrain
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000111
name: germ ring
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-536
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0000038 ! margin
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: start ZFS:0000018 ! Gastrula:Germ-ring
[Term]
id: ZFA:0000112
name: gut
namespace: zebrafish_anatomy
def: "The alimentary or digestive tract, and associated organs." [ZFIN:curator]
synonym: "alimentary canal" RELATED []
synonym: "gut tube" RELATED []
xref: ZFIN:ZDB-ANAT-010921-537
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000113
name: head mesenchyme
namespace: zebrafish_anatomy
def: "Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head. (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-538
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000393 ! mesenchyme
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000114
name: heart
namespace: zebrafish_anatomy
def: "Blood pumping organ composed of four chambers: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-539
is_a: ZFA:0000496 ! organ
relationship: develops_from ZFA:0000360 ! heart tube
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000010 ! cardiovascular system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000115
name: heart rudiment
namespace: zebrafish_anatomy
def: "The migrating myocardial precursors of the heart rudiment form a cone like structure between 19.5hpf and 22hpf, and eventually telescope out into the primitive heart tube at 24hpf. Stainier 2001." [ZFIN:curator]
synonym: "heart cone" RELATED []
synonym: "rudimentary heart" RELATED []
xref: ZFIN:ZDB-ANAT-010921-540
relationship: develops_from ZFA:0000028 ! heart primordium
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000116
name: macula lagena
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-541
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000374 ! lagena
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000117
name: hypoblast
namespace: zebrafish_anatomy
def: "The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm. Kimmel et al, 1995." [ZFIN:curator]
synonym: "mesendoderm" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-542
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0000111 ! germ ring
relationship: start ZFS:0000018 ! Gastrula:Germ-ring
[Term]
id: ZFA:0000118
name: hypophysis
namespace: zebrafish_anatomy
def: "An endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin." [ZFIN:curator]
synonym: "pituitary" RELATED []
xref: ZFIN:ZDB-ANAT-010921-543
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000119
name: retinal inner nuclear layer
namespace: zebrafish_anatomy
synonym: "inner nuclear layer" RELATED PLURAL []
synonym: "intermediate cell layer" RELATED []
xref: ZFIN:ZDB-ANAT-010921-544
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000120
name: lateral line ganglion
namespace: zebrafish_anatomy
synonym: "lateral line ganglia" RELATED PLURAL []
synonym: "llg" RELATED []
xref: ZFIN:ZDB-ANAT-010921-546
is_a: ZFA:0000013 ! cranial ganglia
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000034 ! lateral line system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000121
name: lateral plate mesoderm
namespace: zebrafish_anatomy
synonym: "lateral plate" RELATED []
xref: ZFIN:ZDB-ANAT-010921-547
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000122
name: lens placode
namespace: zebrafish_anatomy
def: "Ectodermal primordium of the lens of the eye. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-548
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: part_of ZFA:0000107 ! eye
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000123
name: liver
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-549
relationship: develops_from ZFA:0000124 ! liver primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000036 ! liver and biliary system
relationship: part_of ZFA:0001159 ! immune system
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000124
name: liver primordium
namespace: zebrafish_anatomy
synonym: "liver bud" RELATED []
xref: ZFIN:ZDB-ANAT-010921-550
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000036 ! liver and biliary system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000125
name: neuromast mandibular
namespace: zebrafish_anatomy
def: "Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromasts mandibular" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-551
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000259 ! mandibular lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000126
name: centrum
namespace: zebrafish_anatomy
def: "Centra are represented by mineralized, calcified, or ossified portions that surround the notochord. The autocentrum, present in Danio and all other living teleosts, is formed by direct ossification outside the elastica externa of the notochord (Arratia, 1999)." [ZFIN:curator]
synonym: "autocentrum" RELATED []
xref: ZFIN:ZDB-ANAT-060331-2
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001189 ! vertebrae
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000127
name: mesenchyme condensations
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-554
is_obsolete: true
[Term]
id: ZFA:0000128
name: midbrain
namespace: zebrafish_anatomy
def: "The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally. Kimmel et al, 1995." [ZFIN:curator]
synonym: "mesencephalon" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-010921-555
relationship: develops_from ZFA:0000148 ! presumptive midbrain
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000130
name: olfactory pit
namespace: zebrafish_anatomy
synonym: "nasal cavity" RELATED []
synonym: "nasal pit" RELATED []
synonym: "olfactory cavity" RELATED []
xref: ZFIN:ZDB-ANAT-010921-558
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000047 ! peripheral olfactory organ
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000131
name: neural keel
namespace: zebrafish_anatomy
def: "An intermediate stage (between the neural plate and neural rod) during the early segmentation period in the morphogenesis of the central nervous system primordium; the keel is roughly triangular shaped in cross section. Kimmel et al, 1995." [ZFIN:curator]
synonym: "presumptive central nervous system" RELATED []
xref: ZFIN:ZDB-ANAT-010921-559
relationship: develops_from ZFA:0000132 ! neural plate
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0001120 ! neuroectoderm
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000132
name: neural plate
namespace: zebrafish_anatomy
def: "The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995." [ZFIN:curator]
synonym: "presumptive central nervous system" RELATED []
xref: ZFIN:ZDB-ANAT-010921-560
relationship: develops_from ZFA:0000417 ! presumptive spinal cord
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0001120 ! neuroectoderm
relationship: start ZFS:0000021 ! Gastrula:90%-epiboly
[Term]
id: ZFA:0000133
name: neural rod
namespace: zebrafish_anatomy
def: "An intermediate stage in the development of the central nervous system present during the segmentation period; the neural rod is roughly cylindrical in shape, forms from the neural keel, and is not yet hollowed out into the neural tube. Kimmel et al, 1995." [ZFIN:curator]
synonym: "presumptive central nervous system" RELATED []
xref: ZFIN:ZDB-ANAT-010921-561
relationship: develops_from ZFA:0000131 ! neural keel
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: part_of ZFA:0001120 ! neuroectoderm
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000135
name: notochord
namespace: zebrafish_anatomy
def: "Rod-like principal supportive element of the embryo and larva, present in the midline just ventral to the neural tube, and differentiating during the segmentation period to form large vacuolated epithelial cells and a surrounding a sheath of fibrous and elastic layers. Layering of the sheath may differ in structure, thickness and development among groups; in cypriniforms there are actually three very thin layers to the sheath. A functional, well developed notochord is present throughout life in certain basal fish groups but not in cypriniforms. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-564
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0000091 ! axial chorda mesoderm
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000317 ! axial skeleton
relationship: part_of ZFA:0001414 ! occipital region
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000136
name: neuromast otic
namespace: zebrafish_anatomy
def: "Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromasts otic" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-565
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000464 ! otic lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000137
name: optic stalk
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-566
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000138
name: otic placode
namespace: zebrafish_anatomy
def: "Primordium of the ear epithelium before it hollows into the otic vesicle, present beside the hindbrain rudiment in the midsegmentation period. Kimmel et al, 1995. (Also see Anatomical Atlas entry for ear by T. Whitfield.)" [ZFIN:curator]
synonym: "otic capsule" RELATED []
synonym: "otocyst" RELATED []
xref: ZFIN:ZDB-ANAT-010921-568
is_a: ZFA:0001138 ! vestibuloauditory system
is_a: ZFA:0001310 ! dorsolateral placode
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000139
name: immature otolith
namespace: zebrafish_anatomy
def: "Brightly refractile stone-like organ within the otic vesicle and positioned over a sensory macula; two form in each vesicle during the late segmentation period. Kimmel et al, 1995. (Also see Anatomical Atlas entry for otolith by T. Whitfield.)" [ZFIN:curator]
synonym: "immature otoliths" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-010921-569
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0000051 ! otic vesicle
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000140
name: pancreas
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-570
is_a: ZFA:0000496 ! organ
relationship: develops_from ZFA:0001390 ! pancreatic bud
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001371 ! pancreatic system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000141
name: pectoral fin bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-571
is_a: ZFA:0001383 ! fin bud
relationship: develops_from ZFA:0001453 ! pectoral fin field
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000142
name: peripheral nervous system
namespace: zebrafish_anatomy
def: "Nervous structures including ganglia outside of the central nervous system. Kimmel et al, 1995." [ZFIN:curator]
synonym: "pns" RELATED []
xref: ZFIN:ZDB-ANAT-010921-572
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000396 ! nervous system
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000143
name: retinal photoreceptor layer
namespace: zebrafish_anatomy
def: "The layer within the retina where the photoreceptor cell receptor segments reside." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-574
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000144
name: pigmented epithelium
namespace: zebrafish_anatomy
def: "A monolayer of pigmented epithelium covering the neural retina; develops from the outer of the two layers of the optic cup. Kimmel et al, 1995." [ZFIN:curator]
synonym: "pigmented retinal epithelium" RELATED []
synonym: "PRE" RELATED []
synonym: "RPE" RELATED []
xref: ZFIN:ZDB-ANAT-010921-575
relationship: develops_from ZFA:0000064 ! presumptive pigmented epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000152 ! retina
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000145
name: CNS tracts and commissures
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-5
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000146
name: presumptive brain
namespace: zebrafish_anatomy
synonym: "brain rudiment" RELATED []
xref: ZFIN:ZDB-ANAT-010921-578
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0000061 ! presumptive central nervous system
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000147
name: presumptive epidermis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-579
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000148
name: presumptive midbrain
namespace: zebrafish_anatomy
synonym: "presumptive mesencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-010921-580
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0000146 ! presumptive brain
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000149
name: primitive heart tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-583
relationship: develops_from ZFA:0000115 ! heart rudiment
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000150
name: pronephric duct
namespace: zebrafish_anatomy
def: "Duct of the embryonic kidney, present bilaterally ventral to the somites and leading to the anal region where it empties separately from, and just posterior to the anus. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-585
relationship: develops_from ZFA:0000067 ! pronephric mesoderm
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000163 ! renal system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000151
name: pronephros
namespace: zebrafish_anatomy
def: "The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.Kimmel et al, 1995." [ZFIN:curator]
synonym: "embryonic kidney" RELATED [ZFIN:ZDB-PUB-961014-576]
synonym: "kidney" RELATED []
xref: ZFIN:ZDB-ANAT-010921-586
is_a: ZFA:0000496 ! organ
relationship: develops_from ZFA:0000067 ! pronephric mesoderm
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000163 ! renal system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000152
name: retina
namespace: zebrafish_anatomy
def: "The portion of the eye developing from the optic primordium and including the neural retina and the retinal pigment layer. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-587
relationship: develops_from ZFA:0001071 ! presumptive retina
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001202 ! optic cup
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000153
name: rhombomere 8
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r8" RELATED []
xref: ZFIN:ZDB-ANAT-010921-588
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001214 ! presumptive rhombomere 8
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000154
name: sinus venosus
namespace: zebrafish_anatomy
def: "Heart region collecting blood from the paired common cardinal veins and delivering to the atrium. One of four heart chambers, the sinus venosus also acts as a pacemaker and is the first to contract. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-590
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000155
name: somite
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal components of early trunk or tail segments or metameres, derived from paraxial mesoderm; forms myotomes, sclerotomes and perhaps dermatomes. Kimmel et al, 1995." [ZFIN:curator]
synonym: "somitic mesoderm" RELATED []
xref: ZFIN:ZDB-ANAT-010921-591
relationship: develops_from ZFA:0000279 ! segmental plate
relationship: develops_from ZFA:0000942 ! paraxial mesenchyme
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001115 ! trunk
relationship: part_of ZFA:0001117 ! tail
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000156
name: somite 20
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-593
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000157
name: somite 30
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-594
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000158
name: compound centrum
namespace: zebrafish_anatomy
def: "This centrum may be formed via the fusion of the terminal centrum and half-centrum. It is sometimes termed the 'ultimate' vertebra. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "last vertebra" RELATED []
synonym: "ultimate vertebra" RELATED []
synonym: "urostyle" RELATED []
xref: ZFIN:ZDB-ANAT-010921-596
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000734 ! specialized centra/vertebra
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000159
name: tectal ventricle
namespace: zebrafish_anatomy
synonym: "cerebral aquaduct" RELATED []
synonym: "medial tectal ventricle" RELATED []
synonym: "mesencephalic ventricle" RELATED []
synonym: "mesencephalic vesicle" RELATED []
synonym: "midbrain ventricle" RELATED []
xref: ZFIN:ZDB-ANAT-010921-597
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000128 ! midbrain
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000160
name: tegmentum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-598
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001354 ! mesencephalic tegmentum
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000161
name: third ventricle
namespace: zebrafish_anatomy
def: "Fluid-filled brain cavity. Kimmel et al, 1995." [ZFIN:curator]
synonym: "3rd ventricle" RELATED []
synonym: "diencephalic ventricle" RELATED []
synonym: "diencephalic vesicle" RELATED []
xref: ZFIN:ZDB-ANAT-010921-599
relationship: develops_from ZFA:0001259 ! forebrain ventricle
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000162
name: trigeminal placode
namespace: zebrafish_anatomy
def: "The ectodermal rudiment of the trigeminal ganglion, distinguishable during much of the segmentation period. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-010921-600
is_a: ZFA:0001310 ! dorsolateral placode
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000163
name: renal system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-601
is_a: ZFA:0001439 ! organ system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000164
name: ventral mesenchyme
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-010921-602
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000393 ! mesenchyme
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000165
name: inferior lobe
namespace: zebrafish_anatomy
synonym: "inferior lobes" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-1
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000347 ! dorsal zone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000166
name: lateral crista
namespace: zebrafish_anatomy
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "sensory patch" RELATED []
xref: ZFIN:ZDB-ANAT-011113-10
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000361 ! horizontal
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000167
name: anal fin skeleton
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-100
is_a: ZFA:0001123 ! median fin skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001162 ! anal fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000168
name: anterior macula
namespace: zebrafish_anatomy
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "am" RELATED []
synonym: "sensory patch" RELATED []
xref: ZFIN:ZDB-ANAT-011113-101
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000386 ! macula
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000169
name: antorbital
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-102
is_obsolete: true
[Term]
id: ZFA:0000170
name: basibranchial
namespace: zebrafish_anatomy
def: "Median elements that are ossified within copulae and are not assigned to a specific branchial arch number. They articulate posterolaterally with the hypobranchials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-104
relationship: develops_from ZFA:0001220 ! copulae
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000171
name: basisphenoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-105
is_obsolete: true
[Term]
id: ZFA:0000172
name: branchial muscle
namespace: zebrafish_anatomy
synonym: "branchial muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-106
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001307 ! pharyngeal musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000173
name: bulbus arteriosus
namespace: zebrafish_anatomy
def: "A pear shaped chamber that functions as a capacitor, maintaining continuous blood flow into the gill arches. The bulbus arteriosus has three distinct layers. Hu et al. 2000." [ZFIN:curator]
synonym: "outflow tract" RELATED []
synonym: "truncus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-107
relationship: develops_from ZFA:0000818 ! vagal neural crest
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000174
name: caudal cerebellar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-108
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000175
name: posterior lateral line nerve
namespace: zebrafish_anatomy
def: "Cranial nerve which enters the brain between cranial nerves VIII and IX; contains afferents and sensory efferents to the posterior lateral line ganglion and middle ganglion. Fibers from the posterior lateral line ganglion innervate the occipital dorsal lateral line and trunk lateral lines." [ZFIN:curator]
synonym: "caudal lateral line nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-109
is_a: ZFA:0000641 ! cranial nerve
is_a: ZFA:0001479 ! lateral line nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001471 ! posterior lateral line system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000176
name: lateral entopeduncular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-11
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000177
name: caudal oblique
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-110
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000178
name: caudal peduncle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-111
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000179
name: caudal root of abducens nerve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-112
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000180
name: caudal vein
namespace: zebrafish_anatomy
def: "Vein in the tail returning blood from the trunk and tail to the heart, leads directly into the posterial cardinal vvein in the posterior trunk. Kimmel et al, 1995." [ZFIN:curator]
synonym: "CV" RELATED []
xref: ZFIN:ZDB-ANAT-011113-113
is_a: ZFA:0000082 ! vein
relationship: develops_from ZFA:0001286 ! caudal vein plexus
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001073 ! axial vasculature
relationship: part_of ZFA:0005037 ! tail vasculature
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000181
name: caudal zone of D
namespace: zebrafish_anatomy
synonym: "posterior zone of dorsal telencephalic area" RELATED []
xref: ZFIN:ZDB-ANAT-011113-114
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000182
name: central caudal thalamic nucleus
namespace: zebrafish_anatomy
synonym: "central posterior thalamic nucleus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-115
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000653 ! dorsal thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000183
name: central pretectum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-116
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000418 ! pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000184
name: cleithrum
namespace: zebrafish_anatomy
def: "Transversely oriented bone connecting the occipital region of the skull dorsally and pectoral girdle ventrally; appears near the end of embryogenesis. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-117
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000185
name: commissura rostral, pars ventralis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-118
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001108 ! anterior commissure
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000186
name: common cardinal vein
namespace: zebrafish_anatomy
def: "Bilaterally paired longitudinal vein; the anterior cardinal returns blood from the head, and the posterior cardinal returns it from the trunk; these two vessels join together on each side as the common cardinal vein (duct of Cuvier; misnamed the vitelline vein) that leads across the yolk cell to the heart's sinus venosus. Kimmel et al, 1995." [ZFIN:curator]
synonym: "duct of Cuvier" RELATED []
xref: ZFIN:ZDB-ANAT-011113-119
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000096 ! cardinal system
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000187
name: lateral granular eminence
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-12
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000307 ! vestibulolateralis lobe
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000188
name: corpus cerebelli
namespace: zebrafish_anatomy
synonym: "cerebellar corpus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-120
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000100 ! cerebellum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000189
name: otic region
namespace: zebrafish_anatomy
synonym: "cranial vault" RELATED []
xref: ZFIN:ZDB-ANAT-011113-121
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000377 ! neurocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000190
name: ganglion
namespace: zebrafish_anatomy
def: "Structures containing a collection of nerve cell bodies. (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator]
synonym: "ganglia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-122
is_a: ZFA:0000015 ! anatomical set
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000142 ! peripheral nervous system
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000191
name: dentary
namespace: zebrafish_anatomy
def: "The dentary is a dermal bone that forms the antero-lateral part of the lower jaw. It first appears around the anterior end of Meckel's cartilage (5.1 mm NL). In the adult, the dentary meets its counterpart anteriorly at the mandibular symphysis. The dentary abuts the retroarticular posteriorly, and it surround the anguloarticular. The dentary is connected to the maxilla by the maxillo-mandibular ligament. Dentary teeth are absent in cypriniforms, but are present in other ostariophysans." [ZFIN:curator]
synonym: "dentary bone" RELATED []
xref: ZFIN:ZDB-ANAT-011113-123
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: part_of ZFA:0001273 ! ventral mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000192
name: descending trigeminal root
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-124
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000193
name: diffuse nuclei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-125
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000165 ! inferior lobe
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000194
name: dorsal accessory optic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-126
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000183 ! central pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000195
name: dorsal depressor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-127
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000648 ! dorsal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000196
name: dorsal hypohyal
namespace: zebrafish_anatomy
def: "The dorsal hypohyal is a small cartilage replacement bone ossifying from the anterodorsal ceratohyal cartilage. Ossification begins on the medial surface of the ceratohyal cartilage at a ligamentous connection to basibranchial 1 (6.8 mm)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-128
is_a: ZFA:0001381 ! hypohyal
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000197
name: dorsal nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-129
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000213 ! habenula
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000198
name: lateral longitundinal fasciculus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-13
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000199
name: dorsal periventricular hypothalamus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-130
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000347 ! dorsal zone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000200
name: dorsal root ganglion
namespace: zebrafish_anatomy
synonym: "dorsal root ganglia" RELATED []
synonym: "DRG" RELATED []
xref: ZFIN:ZDB-ANAT-011113-131
is_a: ZFA:0000190 ! ganglion
relationship: develops_from ZFA:0001024 ! trunk neural crest
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000201
name: dorsal transverse
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-132
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000202
name: efferent branchial artery
namespace: zebrafish_anatomy
synonym: "EBA" RELATED []
xref: ZFIN:ZDB-ANAT-011113-133
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: part_of ZFA:0005003 ! pharyngeal vasculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000203
name: epicentrals
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-134
is_obsolete: true
[Term]
id: ZFA:0000204
name: esophagus
namespace: zebrafish_anatomy
synonym: "oesophagus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-135
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000112 ! gut
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000205
name: external ventral flexor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-136
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000206
name: facial nerve motor nucleus
namespace: zebrafish_anatomy
synonym: "motor nucleus VII" RELATED []
synonym: "nVII" RELATED []
xref: ZFIN:ZDB-ANAT-011113-137
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000207
name: fin musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-138
is_a: ZFA:0000548 ! musculature system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000208
name: gall bladder
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-139
is_a: ZFA:0000496 ! organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000209
name: lateral preglomerular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-14
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000210
name: gigantocellular part of magnocellular preoptic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-140
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000470 ! preoptic area
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000211
name: gill lamella
namespace: zebrafish_anatomy
synonym: "gill lamellae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-141
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000212
name: granular eminence
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-142
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000100 ! cerebellum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000213
name: habenula
namespace: zebrafish_anatomy
def: "The habenula relays impulses from limbic areas of the telencephalon to an unpaired midbrain nucleus, the interpeduncular nucleus." [ZFIN:curator]
synonym: "habenulae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-143
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000509 ! epithalamus
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000214
name: hypobranchial vessel
namespace: zebrafish_anatomy
synonym: "hypobranchial vessels" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-144
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000215
name: inferior olive
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-145
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000216
name: infracarinalis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-146
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000473 ! body musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000217
name: inner ear
namespace: zebrafish_anatomy
def: "The auditory (hearing) and vestibular (balance) organ of the fish, equivalent to the inner ear of amniotes. (See Anatomical Atlas entry for ear by T. Whitfield.)" [ZFIN:curator]
synonym: "ear" RELATED []
synonym: "otic capsule" RELATED []
synonym: "otocyst" RELATED []
xref: ZFIN:ZDB-ANAT-011113-147
relationship: develops_from ZFA:0000051 ! otic vesicle
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001138 ! vestibuloauditory system
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000218
name: interhyal
namespace: zebrafish_anatomy
def: "The interhyal is a small rod-like element that connects the ventral and dorsal parts of the hyoid arch. It articulates laterally with the posterior end of the epihyal and medially at the cartilaginous junction between the hyomandibula and the symplectic. It remains cartilaginous in adult zebrafish and other cypriniforms." [ZFIN:curator]
synonym: "stylohyal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-148
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000219
name: intermediate reticular formation
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-149
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000542 ! medial column
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000220
name: lateral semicircular canal
namespace: zebrafish_anatomy
def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator]
synonym: "lateral semicircular canals" RELATED []
xref: ZFIN:ZDB-ANAT-011113-15
relationship: develops_from ZFA:0000232 ! lateral semicircular canal primordia
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000221
name: internal levator
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-150
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000222
name: isthmic primary nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-152
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000223
name: infraorbital 1
namespace: zebrafish_anatomy
def: "Dermal bone that covers the region between the anterior margin of the eye and the upper jaw. Infraorbital 1 (the lachrymal) is the first and largest bone in the infraorbital series. Bears the anterior most part of the infraorbital canal." [ZFIN:curator]
synonym: "lachrymal bone" RELATED []
synonym: "lacrymal bone" RELATED []
xref: ZFIN:ZDB-ANAT-011113-153
is_a: ZFA:0000376 ! infraorbital
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000224
name: larva
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-154
is_obsolete: true
[Term]
id: ZFA:0000225
name: lateral crista primordia
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-155
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0000220 ! lateral semicircular canal
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000226
name: lateral ethmoid
namespace: zebrafish_anatomy
def: "Large, paired cartilage bones separating the olfactory region from the orbit. Arises from both perichondral and endochondral ossifications (Harrington 1955). Bordered by the mesethmoid anteriorly and overlain by the frontal dorsally, each lateral ethmoid extends medially to meet its fellow posteriorly along the midline. Develops from the laminae orbitonasales." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-156
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000351 ! ethmoid region
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000227
name: lateral hypothalamic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-157
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000707 ! ventral zone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000228
name: lateral line primordium
namespace: zebrafish_anatomy
synonym: "lateral line primordia" RELATED PLURAL []
synonym: "llp" RELATED []
xref: ZFIN:ZDB-ANAT-011113-158
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0000034 ! lateral line system
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000229
name: lateral olfactory tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-159
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000597 ! telencephalic tracts
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000230
name: longitudinal hypochordal
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-16
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000231
name: lateral recess
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-160
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000161 ! third ventricle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000232
name: lateral semicircular canal primordia
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-161
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000233
name: lower oral valve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-162
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000695 ! labial cavities
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000234
name: macula neglecta
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-163
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000559 ! otolith organ
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000235
name: magnocellular superficial pretectal nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-164
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000687 ! superficial pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000236
name: mandibular muscle
namespace: zebrafish_anatomy
synonym: "mandibular muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-165
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001307 ! pharyngeal musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000237
name: medial forebrain bundle diencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-167
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: part_of ZFA:0005111 ! medial forebrain bundle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000238
name: medial olfactory tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-168
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000597 ! telencephalic tracts
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000239
name: mesocoracoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-171
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000240
name: metapterygoid
namespace: zebrafish_anatomy
def: "The metapterygoid is a posterior bone that ossifies in the cartilaginous palatoquadrate arch. It first appears as a rod of bone with an anterodorsally projecting process from the middle of the dorsal surface (6.4 mm). The adult metapterygoid is roughly rectangular in shape with rounded corners and an anterodorsally projecting spine that meets the entopterygoid medially in a synostosis at its posteromedial edge. The posterior end curves dorsally to form the posteroventral surface of the orbit." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-172
relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001272 ! dorsal mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000241
name: midline column
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-173
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000421 ! reticular formation
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000242
name: male organism
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-3
is_a: ZFA:0001094 ! whole organism
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000243
name: neuromast
namespace: zebrafish_anatomy
def: "Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "lateral line neuromast" RELATED []
synonym: "neuromasts" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-175
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000034 ! lateral line system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000244
name: nucleus Edinger-Westphal
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-176
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000245
name: nucleus of the descending root
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-177
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000246
name: nucleus taeniae
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-178
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000247
name: cranial nerve VIII
namespace: zebrafish_anatomy
synonym: "auditory nerve" RELATED []
synonym: "CN-VIII" RELATED []
synonym: "octaval nerve" RELATED []
synonym: "statoacoustic nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-179
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000248
name: magnocellular preoptic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-18
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000470 ! preoptic area
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000249
name: cranial nerve I
namespace: zebrafish_anatomy
synonym: "CN-I" RELATED []
synonym: "olfactory nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-180
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001149 ! olfactory system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000250
name: opercle
namespace: zebrafish_anatomy
synonym: "opercles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-181
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000251
name: opercular-branchiostegal series
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-182
is_obsolete: true
[Term]
id: ZFA:0000252
name: optic tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-183
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000253
name: orbitosphenoid
namespace: zebrafish_anatomy
def: "Large median unpaired cartilage bone consisting of two diverging plates. Positioned medial to the eye. The orbitosphenoid develops from the Trabeculae communis and forms the anterior and anterolateral boundary of the orbital foramen and constitutes a significant part of the sidewalls and floor of the cranial cavity. Bordered by the lateral ethmoid anteriorly, and the pterosphenoid posteriorly, The orbitosphenoid may extend ventrally to meet the parasphenoid. In the adult, the orbitosphenoid is fused ventrally to the parasphenoid via a thin sheet of bone." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-184
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000290 ! sphenoid region
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000254
name: pancreas primordium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-185
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001371 ! pancreatic system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000255
name: paraxial mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-186
relationship: develops_from ZFA:0000591 ! presumptive paraxial mesoderm
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000256
name: pars subcommissuralis of V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-187
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000257
name: pectoral fin cartilage
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-188
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000943 ! pectoral fin skeleton
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000258
name: pelvic fin musculature
namespace: zebrafish_anatomy
synonym: "pelvic fins" RELATED []
xref: ZFIN:ZDB-ANAT-011113-189
is_a: ZFA:0000207 ! fin musculature
relationship: develops_from ZFA:0001449 ! mesenchyme pelvic fin
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001184 ! pelvic fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000259
name: mandibular lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-19
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000260
name: periventricular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-190
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000707 ! ventral zone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000261
name: pharyngohyoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-191
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000262
name: posterior semicircular canal
namespace: zebrafish_anatomy
def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator]
synonym: "posterior semicircular canals" RELATED []
xref: ZFIN:ZDB-ANAT-011113-192
relationship: develops_from ZFA:0000412 ! posterior semicircular canal primordia
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000263
name: precaudal vertebrae
namespace: zebrafish_anatomy
def: "Post-Weberian vertebrae lacking hemal spines (Weitzman, 1962), refers generally to the anterior vertebral region bounding the abdominal cavity. Alternate but not quite synonymous terms are abdominal or trunk vertebrae, which bear parapophyses and ribs. In many actinopterygians dorsal to the posterior abdominal cavity there are transitional vertebrae lacking ribs but also without hemal spines or sometimes even enclosed hemal arches. The primary definition would identify these vertebrae as precaudal. Bird and Mabee, 2003." [ZFIN:curator]
synonym: "abdominal vertebrae" RELATED []
synonym: "trunk vertebrae" RELATED []
xref: ZFIN:ZDB-ANAT-011113-193
is_a: ZFA:0001189 ! vertebrae
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000264
name: preopercle
namespace: zebrafish_anatomy
synonym: "preopercles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-194
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000265
name: presumptive dorsal mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-195
relationship: end ZFS:0000019 ! Gastrula:Shield
relationship: part_of ZFA:0001377 ! presumptive mesoderm
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000266
name: pretecto-mamillary tract
namespace: zebrafish_anatomy
synonym: "pretectomamillary tract" RELATED []
xref: ZFIN:ZDB-ANAT-011113-196
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000267
name: primary olfactory fiber layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-197
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000402 ! olfactory bulb
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000268
name: anal fin proximal radial
namespace: zebrafish_anatomy
def: "Rod-like internal median skeletal support bones of the anal fin, which articulate with the distal radials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-199
is_a: ZFA:0001420 ! anal fin radial
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000269
name: inferior ventral flexor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-2
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000270
name: maxilla
namespace: zebrafish_anatomy
def: "The dermal maxilla forms part of the upper jaw. It is first visible as a small dorsoventrally oriented rod of bone in the lateral region of the upper jaw. Through anterior ossification it becomes S-shaped, with its anteriormost tip directed medially (4.8 mm NL). The posteroventral end of the maxilla is connected to the dentary by a ligament. Maxillary teeth are absent in cypriniforms, but are present in other ostariophysans. . Two barbels are present on the maxilla. The presence of two pairs of maxillary barbels is considered by Cavender and Coburn (1992) to be the primitive condition for the Cyprinidae." [ZFIN:curator]
synonym: "maxillae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-20
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: part_of ZFA:0001272 ! dorsal mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000271
name: radial
namespace: zebrafish_anatomy
synonym: "radials" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-200
relationship: develops_from ZFA:0001456 ! pectoral fin endoskeletal disc
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000272
name: respiratory system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-201
is_a: ZFA:0001439 ! organ system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000273
name: rostral crista
namespace: zebrafish_anatomy
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "sensory patch" RELATED []
xref: ZFIN:ZDB-ANAT-011113-203
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000675 ! rostral vertical
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000274
name: rostral octaval nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-204
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000401 ! octaval nerve sensory nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000275
name: rostral tegmental nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-205
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000276
name: rostrolateral thalamic nucleus of Butler & Saidel
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-206
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000458 ! ventral thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000277
name: scale
namespace: zebrafish_anatomy
synonym: "scales" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-207
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001183 ! dermal superficial region
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0000278
name: secondary gustatory nucleus medulla oblongata
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-208
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000279
name: segmental plate
namespace: zebrafish_anatomy
def: "Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995." [ZFIN:curator]
synonym: "presomitic mesoderm" RELATED []
synonym: "PSM" RELATED []
xref: ZFIN:ZDB-ANAT-011113-209
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000255 ! paraxial mesoderm
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000280
name: medial division
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-21
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000603 ! valvula cerebelli
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000281
name: sensory hair cell posterior macula
namespace: zebrafish_anatomy
def: "Specialized neuronal receptor cells of the lateral line and acoustico-vestibular systems. Kimmel et al, 1995. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.)" [ZFIN:curator]
synonym: "sensory hair cells posterior macula" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-210
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000558 ! posterior macula
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000282
name: sensory system
namespace: zebrafish_anatomy
synonym: "sensory systems" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-211
is_a: ZFA:0001439 ! organ system
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000396 ! nervous system
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000283
name: sternohyoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-212
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000236 ! mandibular muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000284
name: subopercle
namespace: zebrafish_anatomy
synonym: "subopercles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-213
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000285
name: superficial adductor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-214
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000286
name: superficial lateralis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-215
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000473 ! body musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000287
name: superior dorsal flexor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-216
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000288
name: supracarinalis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-217
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000473 ! body musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000289
name: supramaxillae
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-218
is_obsolete: true
[Term]
id: ZFA:0000290
name: sphenoid region
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-219
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000377 ! neurocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000291
name: medial octavolateralis nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-22
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000381 ! lateral line sensory nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000292
name: surface structure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-220
is_a: ZFA:0001308 ! cardinal organism part
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000293
name: synencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-221
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000294
name: torus lateralis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-222
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000295
name: trigeminal ganglion
namespace: zebrafish_anatomy
def: "A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear. Kimmel et al, 1995." [ZFIN:curator]
synonym: "gV" RELATED []
xref: ZFIN:ZDB-ANAT-011113-223
is_a: ZFA:0000013 ! cranial ganglia
relationship: develops_from ZFA:0000162 ! trigeminal placode
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000296
name: uncrossed tecto-bulbar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-225
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000297
name: vagal lobe
namespace: zebrafish_anatomy
synonym: "motor nucleus X" RELATED []
synonym: "nX" RELATED []
xref: ZFIN:ZDB-ANAT-011113-226
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000298
name: vent
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-227
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000299
name: ventral entopeduncular nucleus V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-228
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000300
name: ventral hypohyal
namespace: zebrafish_anatomy
def: "The ventral hypohyal ossifies first along the anteroventral tip of the ceratohyal cartilage at the insertion of the tendon from the sternohyoideus (5.7 mm)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-229
is_a: ZFA:0001381 ! hypohyal
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000301
name: medial rectus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-23
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000511 ! extraocular musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000302
name: ventral nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-230
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000213 ! habenula
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000303
name: female organism
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-4
is_a: ZFA:0001094 ! whole organism
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000304
name: ventral telencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-232
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000079 ! telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000305
name: ventral sulcus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-233
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000032 ! hypothalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000306
name: ventrolateral thalamic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-234
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000458 ! ventral thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000307
name: vestibulolateralis lobe
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-235
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000100 ! cerebellum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000308
name: prevomer
namespace: zebrafish_anatomy
def: "A thin medial unpaired dermal bone that is kite or paddle-shape. Underlying the ethmoid, and slightly overlapping the parasphenoid posteriorly, the prevomer bears an anterolateral projection that terminates in a concave depression in which the preethmoids sit." [ZFIN:curator]
synonym: "vomer" RELATED [ZFIN:ZDB-PUB-961014-192]
xref: ZFIN:ZDB-ANAT-011113-236
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000351 ! ethmoid region
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000309
name: E-YSL
namespace: zebrafish_anatomy
def: "The portion of the YSL that is outside of the blastoderm margin during epiboly. Kimmel et al, 1995." [ZFIN:curator]
synonym: "external yolk syncytial layer" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-011113-237
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: part_of ZFA:0000088 ! YSL
relationship: start ZFS:0000013 ! Blastula:Oblong
[Term]
id: ZFA:0000310
name: cranial nerve VI
namespace: zebrafish_anatomy
synonym: "abducens nerve" RELATED []
synonym: "CN-VI" RELATED []
xref: ZFIN:ZDB-ANAT-011113-238
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000311
name: adductor mandibulae complex
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-239
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000236 ! mandibular muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000312
name: mesencephalic nucleus of trigeminal nerve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-24
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000313
name: anal inclinator
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-240
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001154 ! anal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000314
name: anterior semicircular canal
namespace: zebrafish_anatomy
def: "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator]
synonym: "anterior semicircular canals" RELATED []
xref: ZFIN:ZDB-ANAT-011113-241
relationship: develops_from ZFA:0000469 ! anterior semicircular canal primordia
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000315
name: asteriscus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-242
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000374 ! lagena
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000316
name: basihyal
namespace: zebrafish_anatomy
def: "The basihyal is the 'tongue' of the a fish, the median and anteriorly projecting element of the ventral hyoid arch.Ossification of the cartilaginous basihyal is first visible at the posterior end of the club-shaped basihyal cartilage (6.0 mm). Ossification spreads throughout the cartilage, except for the anterior tip, which remains cartilaginous. The posteroventral tip extends between the left and right dorsal hypohyals." [ZFIN:curator]
synonym: "basihyoid" RELATED []
synonym: "glossohyal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-243
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000317
name: axial skeleton
namespace: zebrafish_anatomy
def: "The post-cranial structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-244
is_a: ZFA:0000434 ! skeletal system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000318
name: brain stem/spinal tract and commissures
namespace: zebrafish_anatomy
synonym: "brain stem/spinal tracts and commissures" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-245
is_a: ZFA:0000145 ! CNS tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000319
name: branchiostegal membrane
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-246
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000320
name: caudal commissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-247
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000293 ! synencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000321
name: caudal levator
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-248
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000322
name: caudal octaval nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-249
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000401 ! octaval nerve sensory nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000323
name: ethmoid
namespace: zebrafish_anatomy
def: "Median unpaired cartilage bone that ossifies as a perichondral lamellae ensheathing the nasal septum anterodorsally and laterally (Harrington, 1955). In adult D. rerio, the center of the ethmoid remains cartilaginous (Cubbage & Mabee, 1996). The ethmoid meets the supraethmoid dorsally, the lateral ethmoids posterolaterally, and the vomer and parasphenoid ventrally in synostoses. Anterolaterally the mesthmoid meets the preethmoids in synchondroses. " [ZFIN:curator]
synonym: "mesethmoid" RELATED []
xref: ZFIN:ZDB-ANAT-011113-25
relationship: develops_from ZFA:0001321 ! neurocranial trabeculae
relationship: develops_from ZFA:0001405 ! ethmoid cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000351 ! ethmoid region
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000324
name: caudal periventricular hypothalamus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-250
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000634 ! caudal zone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000325
name: caudal thalamic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-251
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000326
name: caudal vertebrae
namespace: zebrafish_anatomy
def: "Vertebrae bearing a hemal arch and spine. The most posterior caudal vertebrae support the caudal fin and are referred to as preural vertebrae. " [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-252
is_a: ZFA:0001189 ! vertebrae
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000327
name: central zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-254
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000328
name: cephalic musculature
namespace: zebrafish_anatomy
synonym: "head muscles" RELATED []
xref: ZFIN:ZDB-ANAT-011113-255
is_a: ZFA:0000548 ! musculature system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000329
name: chorion
namespace: zebrafish_anatomy
def: "The egg shell. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-256
is_a: ZFA:0000020 ! extraembryonic structure
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000330
name: cloacal chamber
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-257
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000112 ! gut
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000331
name: commissure infima of Haller
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-258
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000332
name: coracoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-259
relationship: develops_from ZFA:0001455 ! scapulocorocoid
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000333
name: mesovarium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-26
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000403 ! ovary
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000334
name: corpus mamillare
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-260
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000335
name: crossed tecto-bulbar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-261
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000336
name: hypural arches
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-262
is_obsolete: true
[Term]
id: ZFA:0000337
name: dermopalatine
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-263
is_obsolete: true
[Term]
id: ZFA:0000338
name: diencephalic tracts and commissures
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-264
is_a: ZFA:0000145 ! CNS tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000339
name: digestive system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-265
is_a: ZFA:0001439 ! organ system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000340
name: dorsal entopeduncular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-266
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000341
name: dorsal flexor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-267
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000342
name: dorsal inclinator
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-268
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000648 ! dorsal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000343
name: dorsal nucleus of V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-269
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000344
name: middle lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-27
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: part_of ZFA:0005114 ! middle lateral line system
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000345
name: dorsal rectus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-270
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000511 ! extraocular musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000346
name: dorsal tegmental nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-271
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000347
name: dorsal zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-272
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000032 ! hypothalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000348
name: duodenum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-273
is_obsolete: true
[Term]
id: ZFA:0000349
name: epaxialis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-274
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000473 ! body musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000350
name: epipleural
namespace: zebrafish_anatomy
def: "Epipleurals lie below the horizontal septum and are posteroventrally directed. There are ossified epipleurals in certain ostariophysans. In many lower elopocephalan teleosts including ostariophysans the epipleural bones develop an anterodorsal branch so that they are forked proximally." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-275
is_a: ZFA:0000526 ! intermuscular bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000351
name: ethmoid region
namespace: zebrafish_anatomy
synonym: "olfactory region" RELATED []
xref: ZFIN:ZDB-ANAT-011113-276
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000377 ! neurocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000352
name: external cellular layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-277
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000402 ! olfactory bulb
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000353
name: fasciculus retroflexus
namespace: zebrafish_anatomy
synonym: "habenulointerpeduncular tract" RELATED []
xref: ZFIN:ZDB-ANAT-011113-278
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000354
name: gill
namespace: zebrafish_anatomy
synonym: "gills" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-279
is_a: ZFA:0000292 ! surface structure
is_a: ZFA:0000496 ! organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000272 ! respiratory system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000355
name: roof plate midbrain
namespace: zebrafish_anatomy
synonym: "roof plate midbrain" RELATED []
xref: ZFIN:ZDB-ANAT-011113-28
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000128 ! midbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000356
name: gill raker
namespace: zebrafish_anatomy
def: "Gill rakers are small anterior projections present on all of the branchial arches." [ZFIN:curator]
synonym: "gill rakers" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-280
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: part_of ZFA:0000354 ! gill
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000357
name: glomerular layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-281
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000402 ! olfactory bulb
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000358
name: granular layer corpus cerebelli
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-282
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000188 ! corpus cerebelli
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000359
name: habenular commissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-283
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000360
name: heart tube
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-284
relationship: develops_from ZFA:0000149 ! primitive heart tube
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000361
name: horizontal
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-285
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000362
name: hypaxialis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-287
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000473 ! body musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000363
name: hypobranchial
namespace: zebrafish_anatomy
def: "Hypobranchials are the most medial of the bilaterally paired elements of the gill arches. Hypobranchial ossifications 1-3 (of 4) develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 2. The hypobranchials articulate anteromedially with the basibranchials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-288
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000364
name: hypural
namespace: zebrafish_anatomy
def: "Expanded and laterally flattened hemal arches and spines. They support the lepidotrichia of the caudal fin. The hypurals form ventral to the posterior tip of the dorsally-flexed notochord. In zebrafish condensations of the hypurals begin forming at approximately 6 dpf (4.1 mm NL, notochord length). Mabee and Bird, 2001." [ZFIN:curator]
synonym: "hyp" RELATED []
synonym: "hypuralia" RELATED []
synonym: "hypurals" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-289
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000859 ! specialized hemal arch and spine
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000365
name: nasal bone
namespace: zebrafish_anatomy
def: "Paired dermal bones, likened to a bone tube, positioned lateral to the supraethmoid. Nasal bones are transversed by the anterior most part of the supraorbital canals and bear one neuromast foramen in zebrafish Cubbage and Mabee, 1996." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-29
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000351 ! ethmoid region
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000366
name: inferior raphe nucleus
namespace: zebrafish_anatomy
synonym: "posterior raphe nucleus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-290
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001429 ! raphe nucleus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000367
name: infraorbital bridge
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-291
is_obsolete: true
[Term]
id: ZFA:0000368
name: integument
namespace: zebrafish_anatomy
def: "The outer protective barrier that separates the animal from its aquatic environment. Le Guellec et al, 2004." [ZFIN:curator]
synonym: "skin" RELATED []
xref: ZFIN:ZDB-ANAT-011113-292
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000369
name: intermandibularis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-293
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000236 ! mandibular muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000370
name: intermediate thalamic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-294
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000458 ! ventral thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000371
name: internal pharyngoclavicularis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-295
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000372
name: interpeduncular nucleus medulla oblongata
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-296
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000373
name: juvenile
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-297
is_obsolete: true
[Term]
id: ZFA:0000374
name: lagena
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-298
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000559 ! otolith organ
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000375
name: last preural centrum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-299
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000376
name: infraorbital
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-3
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: part_of ZFA:0001410 ! orbital region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000377
name: neurocranium
namespace: zebrafish_anatomy
def: "Regional skeletal system surrounding the brain." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-30
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000737 ! cranial skeleton
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000378
name: lateral cristae
namespace: zebrafish_anatomy
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "lc" RELATED []
synonym: "sensory patches" RELATED []
xref: ZFIN:ZDB-ANAT-011113-300
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000220 ! lateral semicircular canal
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000379
name: lateral forebrain bundle diencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-301
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000380
name: lateral lemniscus nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-302
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000381
name: lateral line sensory nuclei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-303
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000382
name: acellular anatomical structure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-5
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0000383
name: lateral rectus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-305
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000511 ! extraocular musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000384
name: levator arcus palatini
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-307
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000236 ! mandibular muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000385
name: lymphatic system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-308
is_a: ZFA:0000010 ! cardiovascular system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000386
name: macula
namespace: zebrafish_anatomy
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "maculae" RELATED PLURAL []
synonym: "sensory patch" RELATED []
xref: ZFIN:ZDB-ANAT-011113-309
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000217 ! inner ear
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000387
name: nucleus motorius of nervi vagi
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-31
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000388
name: medial caudal lobe
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-311
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000307 ! vestibulolateralis lobe
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000389
name: medial funicular nucleus medulla oblongata
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-312
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000390
name: medial preglomerular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-313
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000391
name: medial zone of D
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-314
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000392
name: median tuberal portion
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-315
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000032 ! hypothalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000393
name: mesenchyme
namespace: zebrafish_anatomy
def: "A mesh-like cell arrangement, less compact than an epithelium. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-316
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000394
name: molecular layer corpus cerebelli
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-317
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000188 ! corpus cerebelli
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000395
name: muscle pioneer somite 2
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 2" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-318
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000843 ! slow muscle cell somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000396
name: nervous system
namespace: zebrafish_anatomy
def: "A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS). (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-319
is_a: ZFA:0001439 ! organ system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000397
name: nucleus subglomerulosis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-32
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000398
name: nucleus isthmi
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-320
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000399
name: secondary gustatory nucleus trigeminal nuclei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-321
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000400
name: occipital lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "supratemporal lateral line" RELATED []
xref: ZFIN:ZDB-ANAT-011113-322
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000401
name: octaval nerve sensory nuclei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-323
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000402
name: olfactory bulb
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-324
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000079 ! telencephalon
relationship: part_of ZFA:0001149 ! olfactory system
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000403
name: ovary
namespace: zebrafish_anatomy
def: "Female reproductive organ." [ZFIN:curator]
synonym: "ovaries" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-328
is_a: ZFA:0000413 ! gonad
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000303 ! female organism
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0000404
name: paracommissural nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-329
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000293 ! synencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000405
name: cranial nerve III
namespace: zebrafish_anatomy
synonym: "CN-III" RELATED []
synonym: "occulomotor" RELATED []
synonym: "oculomotor nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-33
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000406
name: parvocellular superficial pretectal nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-330
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000687 ! superficial pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000407
name: pectoral girdle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-331
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000943 ! pectoral fin skeleton
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000408
name: periventricular nucleus of caudal tuberculum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-333
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000410
name: postcleithrum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-335
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000411
name: posterior crista primordia
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-336
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0000262 ! posterior semicircular canal
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000412
name: posterior semicircular canal primordia
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-337
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000413
name: gonad
namespace: zebrafish_anatomy
def: "The part of the reproductive system that produces and releases eggs (ovary) or sperm (testis)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-1
is_a: ZFA:0000496 ! organ
relationship: develops_from ZFA:0001262 ! gonad primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000632 ! reproductive system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000414
name: presumptive cephalic mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-339
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0000415
name: esophageal sphincter
namespace: zebrafish_anatomy
synonym: "oesophagial sphincter" RELATED []
xref: ZFIN:ZDB-ANAT-011113-34
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000416
name: presumptive endoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-340
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000019 ! Gastrula:Shield
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000417
name: presumptive spinal cord
namespace: zebrafish_anatomy
synonym: "presumptive spinal cord neural keel" RELATED []
synonym: "presumptive spinal cord neural plate" RELATED []
synonym: "presumptive spinal cord neural rod" RELATED []
xref: ZFIN:ZDB-ANAT-011113-343
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0000061 ! presumptive central nervous system
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000418
name: pretectum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-344
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000419
name: pterosphenoid
namespace: zebrafish_anatomy
def: "Paired cartilage bones, flat and hexagonal in shape that contact the orbitosphenoid anteriorly. Roofed by the frontal and bordered posteriorly by the prootic and sphenotic, the pterosphenoid bears foramina that accommodate branches of the trigeminal and facial nerves." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-345
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000290 ! sphenoid region
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000420
name: renal artery
namespace: zebrafish_anatomy
synonym: "renal arteries" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-346
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000421
name: reticular formation
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-347
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000422
name: retroarticular
namespace: zebrafish_anatomy
def: "The retroarticular is a cartilage bone that forms at the posteroventral tip of Meckel's cartilage where the interoperculomandibular ligament attaches (5.1 mm NL). In the adult it is basically triangular in shape. The retroarticular is ligamentously connected to the interopercle and preopercle posteriorly and abuts the ventral shelf of the dentary anteriorly." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-348
relationship: develops_from ZFA:0001205 ! Meckel's cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001273 ! ventral mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000423
name: anterior cardinal vein
namespace: zebrafish_anatomy
synonym: "ACV" RELATED []
synonym: "rostral cardinal veins" RELATED []
xref: ZFIN:ZDB-ANAT-011113-349
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000096 ! cardinal system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000424
name: opercular lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-35
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000425
name: anterior lateral line nerve
namespace: zebrafish_anatomy
def: "Cranial nerve which enters the brain between cranial nerves VI and VII; contains afferents and sensory efferents to the anterior lateral line ganglia." [ZFIN:curator]
synonym: "rostral lateral line nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-350
is_a: ZFA:0000641 ! cranial nerve
is_a: ZFA:0001479 ! lateral line nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001468 ! anterior lateral line system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000426
name: rostral parvocellular preoptic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-351
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000470 ! preoptic area
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000427
name: rostral thalamic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-352
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000653 ! dorsal thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000428
name: saccule
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-353
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000559 ! otolith organ
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000429
name: scaphium
namespace: zebrafish_anatomy
def: "The scaphium is a modification of NA 1 in which the neural arch is reduced and fused to a cup-shaped ossification of membrane bone, the concha. The second Weberian ossicle, consisting of three parts: the concha, the ascending process, and the articulating process." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-354
is_a: ZFA:0001066 ! neural arch
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000461 ! Weberian ossicle
relationship: part_of ZFA:0001167 ! vertebra 1
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000430
name: secondary gustatory tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-355
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000431
name: semicircular canal
namespace: zebrafish_anatomy
def: "Fluid-filled toroidal spaces, arranged orthogonally to each other in the ear, that detect angular accelerations. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)" [ZFIN:curator]
synonym: "scc" RELATED []
synonym: "semicircular canals" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-356
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000217 ! inner ear
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000433
name: sensory trigeminal nuclei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-358
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000434
name: skeletal system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-359
is_a: ZFA:0001439 ! organ system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000435
name: cranial nerve II
namespace: zebrafish_anatomy
def: "A collection of nerve cells that project visual information from the eyes to the brain. (Source: BioGlossary, www.Biology-Text.com)" [ZFIN:curator]
synonym: "CN-II" RELATED []
synonym: "optic" RELATED []
synonym: "optic nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-36
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000436
name: spleen
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-360
is_a: ZFA:0000496 ! organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: part_of ZFA:0001159 ! immune system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000437
name: stomach
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-361
is_obsolete: true
[Term]
id: ZFA:0000438
name: parhypural
namespace: zebrafish_anatomy
def: "Hemal arch and spine of preural centrum 1. The parhypural is defined as the most posterior hemal arch with an open canal through which the ventral aorta passes. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "phy" RELATED []
xref: ZFIN:ZDB-ANAT-011113-363
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000859 ! specialized hemal arch and spine
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000439
name: superficial pelvic abductor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-364
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000258 ! pelvic fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000440
name: superior raphe nucleus
namespace: zebrafish_anatomy
synonym: "anterior raphe nucleus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-365
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001429 ! raphe nucleus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000441
name: suprachiasmatic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-366
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000183 ! central pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000442
name: supraneural
namespace: zebrafish_anatomy
def: "Supraneurals independent, median, elongate, rod-like cartilages or bones in the dorsal skeletogenous septum between the cranium and the dorsal fin. In actinopterygians, supraneurals develop from cartilages that are independent of the neural spine (Arratia et al., 2001)." [ZFIN:curator]
synonym: "sn" RELATED []
xref: ZFIN:ZDB-ANAT-011113-367
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000317 ! axial skeleton
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000443
name: supraorbital lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-368
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000444
name: suspensoria
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-369
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001401 ! dorsal hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000445
name: optic tectum
namespace: zebrafish_anatomy
def: "The roof of the midbrain, morphologically visible by the end of the segmentation period. Kimmel et al, 1995." [ZFIN:curator]
synonym: "dorsal midbrain" RELATED []
synonym: "tectum" RELATED [ZFIN:ZDB-PUB-961014-576]
synonym: "tectum opticum" RELATED []
xref: ZFIN:ZDB-ANAT-011113-37
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001353 ! mesencephalic tectum
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000446
name: tecto-bulbar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-370
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000447
name: tela chorioidea
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-371
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000696 ! telencephalic ventricle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000448
name: tertiary gustatory nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-372
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000449
name: torus longitudinalis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-373
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001353 ! mesencephalic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000450
name: trochlear motor nucleus
namespace: zebrafish_anatomy
synonym: "motor nucleus IV" RELATED []
synonym: "nIV" RELATED []
xref: ZFIN:ZDB-ANAT-011113-374
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000451
name: upper oral valve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-375
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000695 ! labial cavities
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000452
name: urohyal
namespace: zebrafish_anatomy
def: "The urohyal is a median dermal bone that ossifies in the membrane between the paired sternohyoideus muscles ventral to the anterior end of copula 1. It is an unpaired ossification of the tendon of the sternohyoideos muscles in basal teleosts, and it is paired in catfishes (Arratia and Schultze, 1990)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-376
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000453
name: cranial nerve X
namespace: zebrafish_anatomy
synonym: "CN-X" RELATED []
synonym: "vagal nerve" RELATED []
synonym: "vagus nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-377
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001101 ! gustatory system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000454
name: ventral accessory optic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-378
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000183 ! central pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000455
name: ventral flexor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-379
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000456
name: ventral nucleus of V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-380
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000457
name: ventral rectus
namespace: zebrafish_anatomy
synonym: "ventral recti" RELATED []
xref: ZFIN:ZDB-ANAT-011113-381
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: part_of ZFA:0000511 ! extraocular musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000458
name: ventral thalamus
namespace: zebrafish_anatomy
synonym: "prethalamus" RELATED [ZFIN:ZDB-PUB-060207-11]
xref: ZFIN:ZDB-ANAT-011113-382
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001215 ! thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000459
name: ventromedial thalamic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-384
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000458 ! ventral thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000460
name: Mauthner axon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-386
is_obsolete: true
[Term]
id: ZFA:0000461
name: Weberian ossicle
namespace: zebrafish_anatomy
def: "A group of modified neural arches and spines of the first four vertebrae. These include, from anterior to posterior, the claustrum, scaphuium, intercalarium, and tripus. The os suspensorium is considered to be a fifth ossicle. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "Weberian ossicles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-387
is_a: ZFA:0000015 ! anatomical set
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001188 ! Weberian apparatus
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000462
name: abductor hyohyoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-388
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000521 ! hyoid muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000463
name: adductor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-389
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000464
name: otic lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-39
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000465
name: adductor operculi
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-390
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000521 ! hyoid muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000466
name: anal depressor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-391
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001154 ! anal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000467
name: anguloarticular
namespace: zebrafish_anatomy
def: "The anguloarticular is a compound bone that results of the fusion of the dermal angular and the cartilaginous articular and forms the posterior part of the lower jaw. The dermal part ossifies initially on the posterolateral surface of Meckel's cartilage near the articulation with the quadrate (5.5 mm NL). A posterior process forms, creating a synovial joint with the quadrate." [ZFIN:curator]
synonym: "articular" RELATED []
xref: ZFIN:ZDB-ANAT-011113-392
relationship: develops_from ZFA:0001205 ! Meckel's cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: part_of ZFA:0001273 ! ventral mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000468
name: anterior crista primordia
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-393
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0000314 ! anterior semicircular canal
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000469
name: anterior semicircular canal primordia
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-394
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000470
name: preoptic area
namespace: zebrafish_anatomy
synonym: "area praeoptica" RELATED []
synonym: "area preoptica" RELATED []
xref: ZFIN:ZDB-ANAT-011113-395
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000471
name: atrium
namespace: zebrafish_anatomy
def: "One of four heart chambers." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-396
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0000472
name: basioccipital
namespace: zebrafish_anatomy
def: "Large median unpaired cartilage bone that contacts the exocciptal, epiotic and pterotic dorsally, and the parasphenoid anteriorly. Forms the posteroventral hind margin of the cranium, articulates with the centrum of the first vertebra. Bears a posteroventral pharyngeal process that is flattened ventrally and opposes the pharyngeal teeth of the fifth pair of ceratobranchials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-397
relationship: develops_from ZFA:0001423 ! parachordal cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001414 ! occipital region
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000473
name: body musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-399
is_a: ZFA:0000548 ! musculature system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000474
name: intercalar
namespace: zebrafish_anatomy
def: "Small membrane bone homologous with a cartilage bone in more basal fishes (Patterson, 1977). Situated between the exoccipital and the pterotic at point of attachment of short ligament that originates on the ventral arm of the posttemporal." [ZFIN:curator]
synonym: "opisthotic" RELATED []
xref: ZFIN:ZDB-ANAT-011113-4
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000475
name: paraventricular organ
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-40
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000476
name: branchiostegal ray
namespace: zebrafish_anatomy
def: "Branchiostegal rays are thin dermal bones that support the branchiostegal membrane. Three dermal branchiostegal rays form in the branchiostegal membrane ventral to the ceratohyal cartilage. The most posterior ray, branchiostegal 3, ossifies first (3.4 mm NL), and the most anterior ray, branchiostegal 1, ossifies last (5.5 mm NL). The most posterior two branchiostegals (2 and 3) insert externally on the ceratohyal; their anterodorsal tips are thickened triangles, and the rays are expanded. The bifurcated tip of the acinaciform anteriormost ray lies at the ventral margin of the ceratohyal." [ZFIN:curator]
synonym: "branchiostegal rays" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-400
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000477
name: posterior cardinal vein
namespace: zebrafish_anatomy
def: "Continuation of the caudal vein cranial to the anal pore. The cardinal vein splits into a pair of vessels in the cranial trunk, just caudal to the radix of the aorta. The posterior cardinals each empty into the common cardinal vein. " [ZFIN:curator]
synonym: "axial vein" RELATED []
synonym: "caudal cardinal veins" RELATED []
synonym: "PCV" RELATED []
synonym: "postcardinal vein" RELATED []
xref: ZFIN:ZDB-ANAT-011113-401
is_a: ZFA:0000082 ! vein
relationship: develops_from ZFA:0005077 ! vascular cord
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000096 ! cardinal system
relationship: part_of ZFA:0001073 ! axial vasculature
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000478
name: caudal crista
namespace: zebrafish_anatomy
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "sensory patch" RELATED []
xref: ZFIN:ZDB-ANAT-011113-402
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000483 ! caudal vertical
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000479
name: caudal mesencephalo-cerebellar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-403
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000480
name: caudal octavolateralis nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-404
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000381 ! lateral line sensory nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000481
name: caudal preglomerular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-405
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000482
name: caudal tuberal nucleus
namespace: zebrafish_anatomy
synonym: "posterior tuberal nucleus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-406
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000483
name: caudal vertical
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-407
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000484
name: celiacomesenteric artery
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-408
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000485
name: central nucleus inferior lobe
namespace: zebrafish_anatomy
synonym: "central nucleus inferior lobes" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-409
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000165 ! inferior lobe
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000486
name: parietal bone
namespace: zebrafish_anatomy
def: "Paired dermal bone that covers the hind part of the cranium, overlapping the dorsal edge of the sphenotic, pterotic, epiotic and the anterior edge of the supraoccipital. The parietal are overlapped anteriorly by the frontal." [ZFIN:curator]
synonym: "post parietal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-41
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000487
name: central zone of D
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-410
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000488
name: ceratobranchial
namespace: zebrafish_anatomy
def: "Ceratobranchials are bilaterally paired cartilage bones that form part of the ventral branchial arches. They articulate medially with the hypobranchials and laterally and dorsally with the epibranchials. Ceratobranchials 1-5 ossify in the ceratobranchial cartilages." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-411
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000489
name: circumorbital series
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-412
is_obsolete: true
[Term]
id: ZFA:0000490
name: commissura cerebelli
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-413
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000100 ! cerebellum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000491
name: commissure of the caudal tuberculum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-414
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000492
name: coracoradialis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-415
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000493
name: decussation of medial funicular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-416
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000494
name: deep white zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-417
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000495
name: infraorbital 5
namespace: zebrafish_anatomy
def: "Plate like dermal bone with usually only one neuromast pore (Nelson, 1969). The last infraorbital bone in the series is referred to as the dermosphenotic (Nelson, 1969). In basal teleosts it is usually the sixth bone in the series but in zebrafish it is the fifth bone." [ZFIN:curator]
synonym: "dermosphenotic" RELATED []
xref: ZFIN:ZDB-ANAT-011113-418
is_a: ZFA:0000376 ! infraorbital
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000496
name: organ
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-6
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001094 ! whole organism
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000497
name: pelvic adductor profundus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-42
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000258 ! pelvic fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000498
name: dilator operculi
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-420
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000236 ! mandibular muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000499
name: dorsal arrector
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-421
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000500
name: dorsal erector
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-422
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000648 ! dorsal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000501
name: dorsal funiculus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-423
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000502
name: dorsal motor nucleus trigeminal nerve
namespace: zebrafish_anatomy
synonym: "motor nucleus V" RELATED []
synonym: "nV" RELATED []
xref: ZFIN:ZDB-ANAT-011113-424
is_a: ZFA:0001365 ! trigeminal motor nuclei
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000503
name: dorsal oblique branchial muscle
namespace: zebrafish_anatomy
synonym: "dorsal oblique branchial muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-425
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000504
name: dorsal retractor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-426
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000505
name: dorsal telencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-427
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000079 ! telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000506
name: dorsal zone of D
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-428
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000507
name: epineural
namespace: zebrafish_anatomy
def: "Some or all epineural bones ossify free from the neural arches in most teleosts. In some lower teleosts, e.g., Leptolepis, Hiodon, elopiforms and albuliforms, ossification proceeds from the attachment point of the ligament to the arch, and the epineural is a process of the neural arch. In many lower teleosts epineurals are forked proximally." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-429
is_a: ZFA:0000526 ! intermuscular bone
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000508
name: pelvic radials
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-43
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000565 ! pelvic girdle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000509
name: epithalamus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-430
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000510
name: external levatores
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-432
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000511
name: extraocular musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-433
is_a: ZFA:0000328 ! cephalic musculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000512
name: facial lobe
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-434
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000513
name: fast muscle cell somite 1
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 1" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-435
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000924 ! myotome somite 1
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000514
name: frontal bone
namespace: zebrafish_anatomy
def: "Large elongated paired dermal bones that roof the cranium and bear part of the supraorbital canal. The frontal bones cover the upper edge of the lateral ethmoid, orbitosphenoid and pterosphenoids and overlaps the parietal bone posteriorly." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-436
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000377 ! neurocranium
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000515
name: gill arch
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-438
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000516
name: periventricular grey zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-44
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000517
name: glossopharyngeal lobe
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-440
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000518
name: griseum centrale
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-441
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000519
name: hemal arch
namespace: zebrafish_anatomy
def: "Hemal arches extend ventrally from the centra of caudal and transitional vertebrae to enclose the caudal artery and vein. In cyprinids, the hemal arch forms directly in membrane bone." [ZFIN:curator]
synonym: "ventral arcocentrum" RELATED []
xref: ZFIN:ZDB-ANAT-011113-442
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001361 ! basiventral
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000520
name: horizontal commissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-443
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000521
name: hyoid muscle
namespace: zebrafish_anatomy
synonym: "hyoid muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-444
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001307 ! pharyngeal musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000522
name: inferior hyohyoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-445
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000521 ! hyoid muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000523
name: inferior reticular formation
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-446
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000542 ! medial column
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000524
name: infraorbital lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-447
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001470 ! anterior lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000525
name: intercalarium
namespace: zebrafish_anatomy
def: "Third Weberian ossicle. The intercalarium is a Y- or T-shaped modification of neural arch 2 in which an anterolateral process (the manubrium) is embedded in the interossicular ligament; other parts include the ascending and articulating processes. Bird and Mabee, 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-448
is_a: ZFA:0001066 ! neural arch
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000461 ! Weberian ossicle
relationship: part_of ZFA:0001168 ! vertebra 2
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000526
name: intermuscular bone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-449
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000317 ! axial skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000527
name: pharyngobranchial
namespace: zebrafish_anatomy
def: "The pharyngobranchials are the dorsalmost bones of the branchial arches located immediately dorsal and medial to the epibranchials." [ZFIN:curator]
synonym: "infrapharyngobranchial" RELATED []
xref: ZFIN:ZDB-ANAT-011113-45
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000528
name: interradialis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-450
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000529
name: kidney
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-451
is_a: ZFA:0000496 ! organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000163 ! renal system
relationship: part_of ZFA:0001159 ! immune system
relationship: part_of ZFA:0001438 ! coelom
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000530
name: lapillus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-452
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000700 ! utricle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000531
name: lateral column
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-453
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000421 ! reticular formation
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000532
name: lateral division
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-454
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000603 ! valvula cerebelli
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000533
name: lateral funiculus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-455
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000534
name: lateral longitudinal fasciculus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-456
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000535
name: lateral reticular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-457
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000531 ! lateral column
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000536
name: lateral zone of D
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-458
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000537
name: levator operculi
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-459
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000521 ! hyoid muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000538
name: rib
namespace: zebrafish_anatomy
def: "Ribs are intersegmental rod-shaped bones that form in the peritoneal membrane and attach to the vertebral parapophyses. They protect and support internal organs." [ZFIN:curator]
synonym: "dorsal rib" RELATED []
synonym: "pleural rib" RELATED []
xref: ZFIN:ZDB-ANAT-011113-46
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000317 ! axial skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000539
name: locus coeruleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-460
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000540
name: magnocellular octavl nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-461
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000401 ! octaval nerve sensory nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000541
name: marginal blastomere
namespace: zebrafish_anatomy
def: "Cells (incompletely cleaved before the YSL forms), located at the surface just at the rim of the blastodisc, external to the deep blastomeres. Kimmel et al, 1995." [ZFIN:curator]
synonym: "marginal blastomeres" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-462
is_a: ZFA:0000093 ! blastomere
relationship: end ZFS:0000015 ! Blastula:Dome
relationship: start ZFS:0000005 ! Cleavage:16-cell
[Term]
id: ZFA:0000542
name: medial column
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-463
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000421 ! reticular formation
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000543
name: medial longitudinal fasciculus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-464
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000544
name: medial pterygiophores anal fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-465
is_obsolete: true
[Term]
id: ZFA:0000545
name: medulla oblongata
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-466
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000029 ! hindbrain
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000546
name: mesonephric duct
namespace: zebrafish_anatomy
synonym: "Wolffian duct" RELATED []
xref: ZFIN:ZDB-ANAT-011113-467
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000163 ! renal system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000547
name: mouth
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-468
is_a: ZFA:0000292 ! surface structure
relationship: develops_from ZFA:0001290 ! stomodeum
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: part_of ZFA:0001114 ! head
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000548
name: musculature system
namespace: zebrafish_anatomy
synonym: "muscle" RELATED []
synonym: "muscles" RELATED []
xref: ZFIN:ZDB-ANAT-011113-469
is_a: ZFA:0001439 ! organ system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000549
name: posttemporal
namespace: zebrafish_anatomy
synonym: "postemporal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-47
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000550
name: naris
namespace: zebrafish_anatomy
synonym: "nares" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-470
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000047 ! peripheral olfactory organ
relationship: part_of ZFA:0001114 ! head
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000551
name: nucleus lateralis valvulae
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-471
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000552
name: nucleus ruber
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-472
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000553
name: oculomotor nucleus
namespace: zebrafish_anatomy
synonym: "motor nucleus III" RELATED []
synonym: "nIII" RELATED []
xref: ZFIN:ZDB-ANAT-011113-474
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000554
name: olfactory epithelium
namespace: zebrafish_anatomy
def: "Nasal epithelium wherein ciliated olfactory receptor neurons, supporting cells, and basal cells are located." [ZFIN:curator]
synonym: "nasal epithelium" RELATED []
synonym: "nasal sensory epithelium" RELATED []
xref: ZFIN:ZDB-ANAT-011113-475
relationship: develops_from ZFA:0001431 ! primitive olfactory epithelium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000047 ! peripheral olfactory organ
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000555
name: opercular flap
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-476
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000556
name: optic chiasm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-477
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000557
name: preural 1
namespace: zebrafish_anatomy
def: "Vertebra anterior to the urostyle; sometimes termed the 'penultimate' vertebra. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "penultimate vertebra" RELATED []
synonym: "preural centrum 1" RELATED []
synonym: "pu1" RELATED []
synonym: "second last vertebra" RELATED []
xref: ZFIN:ZDB-ANAT-011113-479
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000734 ! specialized centra/vertebra
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000558
name: posterior macula
namespace: zebrafish_anatomy
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "pm" RELATED []
synonym: "posteromedial macula" RELATED []
synonym: "sensory patch" RELATED []
xref: ZFIN:ZDB-ANAT-011113-48
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000386 ! macula
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000559
name: otolith organ
namespace: zebrafish_anatomy
synonym: "otolith organs" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-480
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000217 ! inner ear
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000560
name: oviduct
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-481
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000303 ! female organism
relationship: part_of ZFA:0000632 ! reproductive system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000561
name: parasphenoid
namespace: zebrafish_anatomy
def: "Long, unpaired median dermal bone that runs almost the entire length of the cranium. Contacts the vomer anteriorly, and the prootic and basioccipital posteriorly. Anteriorly the parasphenoid is a long, thin bone that widens abruptly at the point of contact with the prootic." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-482
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000377 ! neurocranium
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000562
name: parhyural
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-483
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000563
name: pectoral fin musculature
namespace: zebrafish_anatomy
synonym: "pectoral fin muscle" RELATED []
xref: ZFIN:ZDB-ANAT-011113-484
is_a: ZFA:0000207 ! fin musculature
relationship: develops_from ZFA:0001000 ! mesenchyme pectoral fin
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001161 ! pectoral fin
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0000564
name: pelvic abductor profundus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-485
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000258 ! pelvic fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000565
name: pelvic girdle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-486
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001387 ! pelvic fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000566
name: posterior cristae
namespace: zebrafish_anatomy
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "pc" RELATED []
synonym: "sensory patches" RELATED []
xref: ZFIN:ZDB-ANAT-011113-490
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000262 ! posterior semicircular canal
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000567
name: premaxilla
namespace: zebrafish_anatomy
def: "The premaxilla is a bone of the upper jaw. It is an L-shaped bone first visible as a thin sliver in the anterodorsal region of the upper lip, anterior to the dorsal tip of the maxilla (5.7 mm). In the adult, the premaxilla is ligamentously attached to its counterpart at the midline and the kinethmoid posterodorsally, by the premaxillo-rostroid ligaments. Premaxillary teeth are absent in zebrafish." [ZFIN:curator]
synonym: "premaxillae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-492
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001272 ! dorsal mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000568
name: presumptive blood
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-493
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000569
name: presumptive hindbrain
namespace: zebrafish_anatomy
synonym: "presumptive rhombencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-011113-495
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0000146 ! presumptive brain
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000570
name: optic primordium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-496
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000062 ! presumptive forebrain
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0000571
name: presumptive telencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-497
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0000062 ! presumptive forebrain
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000573
name: internal cellular layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-5
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000402 ! olfactory bulb
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000574
name: presumptive diencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-50
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0000062 ! presumptive forebrain
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000575
name: prootic
namespace: zebrafish_anatomy
def: "Paired cartilage bone that contacts the pterosphenoid anteriorly, the sphenotic and the pterotic dorsally, and the epiotic and basioccipital posteriorly. The parasphenoid covers the ventral region of each prootic, the upper edge of which contributes to the hyomandibular facet. Bear foramina that accommodate branches of the trigeminal and facial nerves." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-500
relationship: develops_from ZFA:0001423 ! parachordal cartilage
relationship: develops_from ZFA:0001425 ! basal plate cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000576
name: autopterotic
namespace: zebrafish_anatomy
def: "Paired cartilage bone that contacts the autosphenotic anteriorly, the parietal dorsally, the prootic ventrally, and the epiotic and exoccipital posteriorly. The pterotic encloses the horizontal semicircular canal of the inner ear. The lower edge of the pterotic contributes to the hyomandibular facet." [ZFIN:curator]
synonym: "pterotic" RELATED []
xref: ZFIN:ZDB-ANAT-011113-501
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000577
name: renal portal vein
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-502
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000578
name: ceratohyal
namespace: zebrafish_anatomy
def: "The ceratohyal begins as a ossification in the anterior portion of the ceratohyal cartilage (4.6 mm NL). The posterior end broadens and meets the epihyal in a pad of cartilage. The anterior end broadens and terminates in two heads (8.8 mm). The anterodorsal head forms a synchondrosis with the dorsal hypohyal and the anteroventral head forms a synchondrosis with the ventral hypohyal. All of the branchiostegal rays articulate with the ventral edge of the ceratohyal." [ZFIN:curator]
synonym: "anterior ceratohyal" RELATED []
synonym: "rostral ceratohyal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-505
relationship: develops_from ZFA:0001400 ! ceratohyal cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000579
name: rostral mesencephalo-cerebellar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-506
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000580
name: rostral preglomerular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-507
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000633 ! caudal tuberculum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000581
name: rostral tuberal nucleus
namespace: zebrafish_anatomy
synonym: "anterior tuberal nucleus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-508
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000707 ! ventral zone
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000582
name: saccus dorsalis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-509
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000509 ! epithalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000583
name: scapula
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-510
relationship: develops_from ZFA:0001455 ! scapulocorocoid
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000586
name: preural 2
namespace: zebrafish_anatomy
def: "Vertebra anterior to preural centrum 1; sometimes termed the 'antepenultimate' vertebra. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "antepenultimate vertebra" RELATED []
synonym: "preural centrum 2" RELATED []
synonym: "pu2" RELATED []
synonym: "third last vertebra" RELATED []
xref: ZFIN:ZDB-ANAT-011113-514
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000734 ! specialized centra/vertebra
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000587
name: autosphenotic
namespace: zebrafish_anatomy
def: "Paired cartilage bone that contacts the pterosphenoid anteriorly, the prootic ventrally, and the pterotic posteriorly. Roofed by the frontal bone anteriorly and the parietal bone posteriorly, the sphenotic bears a large anterolateral process that borders the posterodorsal margain of the orbit. The lower edge of the sphenotic contributes to the hyomandibular facet." [ZFIN:curator]
synonym: "sphenotic" RELATED []
xref: ZFIN:ZDB-ANAT-011113-515
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000588
name: statoacoustic (VIII) ganglion
namespace: zebrafish_anatomy
def: "The sensory ganglion of the ear. (See Anatomical Atlas entry for statoacoustic ganglion by T. Whitfield.)" [ZFIN:curator]
synonym: "auditory ganglion" RELATED []
synonym: "gVIII" RELATED []
synonym: "sag" RELATED []
synonym: "statoacoustic ganglia" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-516
is_a: ZFA:0000013 ! cranial ganglia
relationship: develops_from ZFA:0000138 ! otic placode
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001138 ! vestibuloauditory system
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000589
name: sulcus ypsiloniformis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-518
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000505 ! dorsal telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000590
name: oral region
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-519
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000547 ! mouth
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0000591
name: presumptive paraxial mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-52
relationship: end ZFS:0000021 ! Gastrula:90%-epiboly
relationship: part_of ZFA:0001377 ! presumptive mesoderm
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000592
name: superficial pelvic adductor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-520
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000258 ! pelvic fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000593
name: superior reticular formation medial column
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-521
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000542 ! medial column
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000594
name: supracleithrum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-522
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000595
name: supraoccipital
namespace: zebrafish_anatomy
def: "Large shield-shaped unpaired median cartilage bone that contact the parietal anteriorly, and the exocciptial and epiotic laterally. Forms the posterodorsal most point of the cranium. The supraoccipital usually bears a crest that extends posterodorsally." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-523
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001414 ! occipital region
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000596
name: supraorbital series
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-524
is_obsolete: true
[Term]
id: ZFA:0000597
name: telencephalic tracts
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-525
is_a: ZFA:0000145 ! CNS tracts and commissures
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000079 ! telencephalon
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000598
name: testis
namespace: zebrafish_anatomy
def: "Male reproductive organ." [ZFIN:curator]
synonym: "testes" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-526
is_a: ZFA:0000413 ! gonad
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000242 ! male organism
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0000599
name: torus semicircularis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-527
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001353 ! mesencephalic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000600
name: cranial nerve IV
namespace: zebrafish_anatomy
synonym: "CN-IV" RELATED []
synonym: "trochlear" RELATED []
synonym: "trochlear nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-528
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000601
name: pretectal periventricular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-53
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000293 ! synencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000602
name: uroneural
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-530
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000603
name: valvula cerebelli
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-531
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000100 ! cerebellum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000604
name: ventral aorta
namespace: zebrafish_anatomy
def: "Outflow artery from the heart to the aortic arches. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-532
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000605
name: ventral funiculus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-533
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000606
name: ventral oblique branchial muscle
namespace: zebrafish_anatomy
synonym: "ventral oblique branchial muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-534
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000607
name: ventral rhombencephalic commissure brain stem
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-535
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000608
name: ventral transverse
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-536
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000609
name: ventrolateral nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-537
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000599 ! torus semicircularis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000610
name: vertical myoseptum
namespace: zebrafish_anatomy
def: "Connective tissue partitions developing between the myotomes . Kimmel et al, 1995." [ZFIN:curator]
synonym: "transverse myoseptum" RELATED []
xref: ZFIN:ZDB-ANAT-011113-538
is_a: ZFA:0001089 ! myoseptum
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000611
name: visceromotor column
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-539
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000612
name: protractor hyoidei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-54
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000521 ! hyoid muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000614
name: abductor profundus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-542
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000615
name: adductor arcus palatini
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-543
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000521 ! hyoid muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000616
name: adductor profundus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-544
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000617
name: anal erector
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-545
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001154 ! anal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000618
name: ansulate commissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-546
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000619
name: anterior cristae
namespace: zebrafish_anatomy
def: "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)" [ZFIN:curator]
synonym: "ac" RELATED []
synonym: "sensory patches" RELATED []
xref: ZFIN:ZDB-ANAT-011113-547
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000314 ! anterior semicircular canal
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000620
name: autopalatine
namespace: zebrafish_anatomy
def: "The cartilaginous autopalatine forms from the anterior palatoquadrate arch. The first sign of ossification is visible at the anterior tip where it articulates with the maxilla (7.6 mm). In adults there are three processes at the anterior portion of the palatine: a ventromedial process, which forms the socket of the small ball- and- socket joint with the preethmoid; a dorsomedial process, which is connected by a short ligament to the ethmoid; and a lateral process, which extends toward the first infraorbital. Possession of a dorsomedial process, which abuts the ethmoid, is a unique feature shared by Cypriniformes (Fink and Fink, 1981). The palatine has two components, the autopalatine (derived from pars autopalatine) and the dermal component having teeth, the dermopalatine Arratia & Schultze 1990. The element in cypriniforms is only the cartilage part, so that it is more correct to name it autopalatine and not as palatine in general that it implies a fusion of elements (as in perciforms)." [ZFIN:curator]
synonym: "palatine" RELATED []
xref: ZFIN:ZDB-ANAT-011113-549
relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001272 ! dorsal mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000621
name: quadrate
namespace: zebrafish_anatomy
def: "The quadrate is the dorsal bone in the jaw joint with the anguloarticular of the lower jaw. Ossification of the quadrate, a cartilage bone, begins as a posteriorly projecting membranous spine between the symplectic cartilage and the preopercle (5.1 mm NL). The body of the quadrate ossifies first at the ball-and-socket articulation with the anguloarticular (6.5 mm). The adult quadrate is shaped roughly like an inverted triangle with a long, posteriorly projecting spine off its posteroventral edge. The presence of a posteroventral or posterior process of the quadrate is a synapomorphy of Teleostei." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-55
relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001272 ! dorsal mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000622
name: barble
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-550
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000368 ! integument
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000623
name: basipterygium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-551
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000565 ! pelvic girdle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000624
name: brachium conjunctivium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-552
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000625
name: branchial bar
namespace: zebrafish_anatomy
synonym: "branchial bars" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-553
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000056 ! pharynx
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000626
name: bulbo-spinal tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-554
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000627
name: epihyal
namespace: zebrafish_anatomy
def: "The cartilaginous epihyal begins ossifying on the anterior surface of the posterior end of the ceratohyal cartilage near the site of articulation with the interhyal (5.8 mm). It joins the ceratohyal in a pad of persisting cartilage." [ZFIN:curator]
synonym: "caudal ceratohyal" RELATED []
synonym: "posterior ceratohyal" RELATED []
xref: ZFIN:ZDB-ANAT-011113-555
relationship: develops_from ZFA:0001400 ! ceratohyal cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000628
name: caudal fin musculature
namespace: zebrafish_anatomy
def: "The caudal fin is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "tail fin" RELATED []
xref: ZFIN:ZDB-ANAT-011113-556
is_a: ZFA:0000207 ! fin musculature
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001058 ! caudal fin
relationship: part_of ZFA:0001117 ! tail
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000629
name: caudal motor nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-557
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000713 ! abducens motor nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000630
name: caudal parvocellular preoptic nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-558
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000470 ! preoptic area
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000631
name: caudal pretectal nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-559
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000687 ! superficial pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000632
name: reproductive system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-56
is_a: ZFA:0001439 ! organ system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0000633
name: caudal tuberculum
namespace: zebrafish_anatomy
synonym: "posterior tubercle" RELATED []
synonym: "posterior tuberculum" RELATED []
xref: ZFIN:ZDB-ANAT-011113-560
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000634
name: caudal zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-561
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000392 ! median tuberal portion
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000635
name: central pretectal nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-562
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000183 ! central pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000636
name: cerebellar crest
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-563
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000291 ! medial octavolateralis nucleus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000637
name: claustrum
namespace: zebrafish_anatomy
def: "The claustrum is a bilaterally paired cartilage or cartilage replacement bone with extensions of membrane bone forming part of a dorsolateral protective wall around the neural canal between the back of the skull and the beginning of the neural arch series. The first Weberian ossicle. Most recently, de Pinna and Grande (2003) have proposed the claustrum is homologous to the accessory neural arch of lower teleosts." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-564
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000461 ! Weberian ossicle
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000638
name: commissura rostral, pars dorsalis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-565
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001108 ! anterior commissure
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000639
name: commissure of the secondary gustatory nuclei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-566
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000640
name: cornea
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-567
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000107 ! eye
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0000641
name: cranial nerve
namespace: zebrafish_anatomy
def: "Twelve pairs of cranial nerves exit/enter the cranium through openings in the skull. The nerves contain efferent axons with motor and glandular functions, as well as afferent axons from cranial ganglia with sensory functions. The nerves are numbered in a rostral to caudal sequence, with the exception of the lateral line nerves." [ZFIN:curator]
synonym: "cranial nerves" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-568
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000396 ! nervous system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000642
name: decussation of the medial octavolateralis nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-569
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000381 ! lateral line sensory nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000643
name: rostral cerebellar tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-57
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000644
name: dental plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-570
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000547 ! mouth
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000645
name: descending octaval nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-571
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000401 ! octaval nerve sensory nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000646
name: anal fin distal radial
namespace: zebrafish_anatomy
def: "Rod-like internal median skeletal support bones of the anal fin, which articulate with the lepidotrichia distally." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-572
is_a: ZFA:0001420 ! anal fin radial
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000647
name: dorsal caudal thalamic nucleus
namespace: zebrafish_anatomy
synonym: "dorsal posterior thalamic nucleus" RELATED []
xref: ZFIN:ZDB-ANAT-011113-573
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000653 ! dorsal thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000648
name: dorsal fin musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-574
is_a: ZFA:0000207 ! fin musculature
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001173 ! dorsal fin
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000649
name: dorsal horn spinal cord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-575
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000650
name: dorsal motor root of V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-576
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000651
name: dorsal pelvic arrector
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-577
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000258 ! pelvic fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000652
name: dorsal root
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-578
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000653
name: dorsal thalamus
namespace: zebrafish_anatomy
synonym: "thalamus" RELATED [ZFIN:ZDB-PUB-060207-11]
xref: ZFIN:ZDB-ANAT-011113-579
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001215 ! thalamus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000654
name: rostral motor nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-58
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000713 ! abducens motor nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000655
name: dorsomedial optic tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-580
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000252 ! optic tract
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000656
name: ectopterygoid
namespace: zebrafish_anatomy
def: "The ectopterygoid is dermal bone located at the anterior part of the palatoquadrate. It is first visible as a very thin ossification along the anteroventral border of the palatoquadrate cartilage (6.4 mm). In adults it is a long sliver of bone that is narrow anteriorly where it meets the entopterygoid in a synostosis. It is slightly wider at its posterior synostosis with the quadrate." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-581
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: part_of ZFA:0001272 ! dorsal mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000657
name: entopterygoid
namespace: zebrafish_anatomy
def: "The entopterygoid is a dermal bone that forms the anteroventral and ventral surface of the orbit. It develops as a long sliver of bone developing in the membrane dorsomedial to the palatoquadrate cartilage (3.8 mm NL)." [ZFIN:curator]
synonym: "endopterygoid" RELATED []
synonym: "mesopterygoid" RELATED []
xref: ZFIN:ZDB-ANAT-011113-582
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: part_of ZFA:0001272 ! dorsal mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000658
name: epibranchial
namespace: zebrafish_anatomy
def: "Epibranchials are dorsal parts of the gill arches. Epibranchials 1-4 ossify in the epibranchial cartilages in a posterior to anterior progression. The cartilaginous tips of the epibranchials articulate laterally with the cartilaginous tips of the ceratobranchials. Gill rakers are present on the anterior and posterior edges of epibranchials 2 4 and the posterior edge of epibranchial 1. A reduced gill raker is present on the anterior margin of epibranchial 1 in some specimens." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-583
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000659
name: epioccipitals
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-584
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000189 ! otic region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000660
name: epural
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-585
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000661
name: exoccipital
namespace: zebrafish_anatomy
def: "Paired cartilage bone that bears a large foramen (lateral occipital foramen). Contacts the supraoccipital dorsally, the epiotic laterally and the basioccipital ventrally. Forms the posterior hind margin of the cranium and borders the lateral and posterior margins of the forum (foramen) magnum." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-586
relationship: develops_from ZFA:0001423 ! parachordal cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001414 ! occipital region
relationship: part_of ZFA:0001424 ! chondrocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000662
name: external pharyngoclavicularis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-587
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000172 ! branchial muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000663
name: extrascapular
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-588
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000407 ! pectoral girdle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000664
name: cranial nerve VII
namespace: zebrafish_anatomy
synonym: "CN-VII" RELATED []
synonym: "facial nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-589
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001101 ! gustatory system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000665
name: rostral root of abducens nerve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-59
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000666
name: filamental artery
namespace: zebrafish_anatomy
synonym: "filamental arteries" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-590
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000667 ! gill filament
relationship: part_of ZFA:0005003 ! pharyngeal vasculature
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0000667
name: gill filament
namespace: zebrafish_anatomy
def: "Branched region of the gill where respiratory exchange takes place. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-592
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000668
name: cranial nerve IX
namespace: zebrafish_anatomy
synonym: "CN-IX" RELATED []
synonym: "glossopharyngeal nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-594
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001101 ! gustatory system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000669
name: head kidney
namespace: zebrafish_anatomy
def: "The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. Davidson and Zon 2004." [ZFIN:curator]
synonym: "anterior kidney" RELATED []
synonym: "kidney marrow" RELATED []
xref: ZFIN:ZDB-ANAT-011113-595
is_a: ZFA:0000496 ! organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000529 ! kidney
relationship: part_of ZFA:0001158 ! endocrine system
relationship: part_of ZFA:0005023 ! hematopoietic system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000670
name: hepatic vein
namespace: zebrafish_anatomy
synonym: "hepatic veins" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-596
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000671
name: horizontal myoseptum
namespace: zebrafish_anatomy
def: "A connective tissue partition developing at the apex of the chevron-shaped myotome and separating dorsal (epaxial) and ventral (hypaxial) body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-597
is_a: ZFA:0001089 ! myoseptum
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000672
name: hyomandibula
namespace: zebrafish_anatomy
def: "The hyomandibula is the large, dorsal-most member of the hyoid arch. It begins ossifying in the dorsal edge of the hyosymplectic cartilage near the hyomandibular foramen (4.6 mm NL). Ossification spreads through the cartilage, and sheets of membrane bone form off the cartilage model anteriorly and posteriorly (6.6 mm). In the adult, the hyomandibula has cartilage-capped anterior and posterior articulating heads that meet the sphenotic-prootic fossa and the pterotic fossa, respectively, in synovial joints. A posterior knob of bone develops, also capped in cartilage, and it forms a synovial joint with the opercle." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-598
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001401 ! dorsal hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000673
name: hypobranchial artery
namespace: zebrafish_anatomy
def: "A pair of HA are connect one to each AA1. They run rostromedially until at the extreme rostro-ventral midline the two vessels merge and then run straight caudally along the ventral midline until they reach the cranial end of the ventral aorta (VA). There, the single HA passes just dorsal to the rostral end of the VA and then immediately splits again into a pair of HA. The paired HA continue caudally just to either side of the ventral midline. The HA provide blood supply to the ventral branchial region and the heart.Isogai et al. 2001." [ZFIN:curator]
synonym: "HA" RELATED []
xref: ZFIN:ZDB-ANAT-011113-599
is_a: ZFA:0000005 ! artery
relationship: develops_from ZFA:0005005 ! aortic arch 1
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0000674
name: interopercle
namespace: zebrafish_anatomy
synonym: "interopercles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-6
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000675
name: rostral vertical
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-60
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000431 ! semicircular canal
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000676
name: sagitta
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-61
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000428 ! saccule
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000677
name: segmental intercostal artery
namespace: zebrafish_anatomy
synonym: "segmental intercostal arteries" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-62
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000678
name: sensory hair cell anterior macula
namespace: zebrafish_anatomy
def: "Specialized neuronal receptor cells of the lateral line and acoustico-vestibular systems. Kimmel et al, 1995. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.)" [ZFIN:curator]
synonym: "sensory hair cells anterior macula" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-63
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000168 ! anterior macula
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000679
name: sensory root of facial nerve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-64
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000680
name: sinoatrial valve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-65
is_a: ZFA:0005065 ! heart valve
relationship: develops_from ZFA:0001317 ! endocardial cushion
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000154 ! sinus venosus
relationship: part_of ZFA:0000471 ! atrium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000681
name: neural postzygapophyses
namespace: zebrafish_anatomy
def: "Paired, dorsomedially directed processes on the posterior ends of the centra, ligamentously joined to the neural prezygapophyses of the immediately posterior vertebra." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-3
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000126 ! centrum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000682
name: spinal artery
namespace: zebrafish_anatomy
synonym: "spinal arteries" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-67
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000683
name: subcommissural organ
namespace: zebrafish_anatomy
synonym: "SCO" RELATED []
xref: ZFIN:ZDB-ANAT-011113-69
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000293 ! synencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000684
name: intertectal commissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-7
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000685
name: superficial abductor
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-70
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000686
name: superficial grey and white zone
namespace: zebrafish_anatomy
synonym: "superficial grey and white zones" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-71
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000687
name: superficial pretectum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-72
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000418 ! pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000688
name: olfactory support cell
namespace: zebrafish_anatomy
synonym: "support cells" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-73
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000047 ! peripheral olfactory organ
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0000689
name: supracommissural nucleus of V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-74
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000690
name: supraoptic commissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-75
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000691
name: supraorbital bone
namespace: zebrafish_anatomy
def: "Paired dermal bones that form the anterodorsal margin of the orbit." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-76
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: part_of ZFA:0001410 ! orbital region
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000692
name: symplectic
namespace: zebrafish_anatomy
def: "The symplectic is an irregularly rod-shaped cartilage replacement bone articulating with the hyomandibular and quadrate." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-77
relationship: develops_from ZFA:0001422 ! hyosymplectic cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001272 ! dorsal mandibular arch
relationship: part_of ZFA:0001401 ! dorsal hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000693
name: tangential nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-78
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000401 ! octaval nerve sensory nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000694
name: ceratobranchial 5 tooth
namespace: zebrafish_anatomy
def: "The tips of the ceratobranchial5 teeth form before the ceratobranchial itself (3.0 mm NL). As they grow ventrally, they meet the perichondrally ossified surface of ceratobranchial5 and become firmly ankylosed to the bone. Ceratobranchial teeth are the only teeth present in zebrafish and other cypriniforms." [ZFIN:curator]
synonym: "pharyngeal teeth" RELATED []
synonym: "teeth" RELATED []
synonym: "tooth" RELATED []
xref: ZFIN:ZDB-ANAT-011113-79
relationship: develops_from ZFA:0001153 ! tooth placode
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000056 ! pharynx
relationship: part_of ZFA:0001239 ! ceratobranchial 5
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0000695
name: labial cavities
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-8
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000696
name: telencephalic ventricle
namespace: zebrafish_anatomy
synonym: "lateral ventricle" RELATED []
synonym: "telencephalic vesicle" RELATED []
xref: ZFIN:ZDB-ANAT-011113-80
relationship: develops_from ZFA:0001259 ! forebrain ventricle
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000079 ! telencephalon
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000697
name: cranial nerve V
namespace: zebrafish_anatomy
synonym: "CN-V" RELATED []
synonym: "trigeminal nerve" RELATED []
xref: ZFIN:ZDB-ANAT-011113-81
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000698
name: tripus
namespace: zebrafish_anatomy
def: "The fourth Weberian ossicle. The tripus is a complex modification of the parapophysis and rib of the third vertebra. Anteriorly it attaches to the interosseus ligament and posteriorly it extends as a transformator process embedded in the tunica externa of the swimbladder. Bird and Mabee, 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-82
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000461 ! Weberian ossicle
relationship: part_of ZFA:0001169 ! vertebra 3
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0000699
name: ural ossification
namespace: zebrafish_anatomy
synonym: "ural ossifications" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-83
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000700
name: utricle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-84
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000559 ! otolith organ
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000701
name: ventral arrector
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-85
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000563 ! pectoral fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000702
name: ventral horn spinal cord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-86
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000703
name: ventral motor nucleus trigeminal nerve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-87
is_a: ZFA:0001365 ! trigeminal motor nuclei
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000704
name: ventral pelvic arrector
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-88
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000258 ! pelvic fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000705
name: ventral root
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-89
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000706
name: posterior intestine
namespace: zebrafish_anatomy
def: "The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates. Wallace et al, 2005." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-011113-9
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001338 ! intestine
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000707
name: ventral zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-90
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000392 ! median tuberal portion
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000708
name: ventrolateral optic tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-91
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000252 ! optic tract
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000709
name: vestibulo-spinal tract
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-92
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000318 ! brain stem/spinal tract and commissures
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000710
name: viscerosensory commissural nucleus of Cajal
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-93
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000711
name: DEL
namespace: zebrafish_anatomy
def: "A multilayer of deep cells of fairly uniform thickness that forms during early epiboly (at dome stage; upon conversion of the blastodisc to the blastoderm); during gastrulation the DEL (deep cell layer) gives rise to the epiblast and hypoblast. Kimmel et al, 1995." [ZFIN:curator]
synonym: "deep cell layer" RELATED [ZFIN:ZDB-PUB-961014-576]
synonym: "DEL cells" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-011113-94
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0001473 ! deep blastomere
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0001176 ! blastoderm
relationship: start ZFS:0000016 ! Blastula:30%-epiboly
[Term]
id: ZFA:0000712
name: I-YSL
namespace: zebrafish_anatomy
def: "The portion of the YSL that lies deep to the blastoderm during epiboly. Kimmel et al, 1995." [ZFIN:curator]
synonym: "internal yolk syncytial layer" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-011113-95
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: part_of ZFA:0000088 ! YSL
relationship: start ZFS:0000013 ! Blastula:Oblong
[Term]
id: ZFA:0000713
name: abducens motor nuclei
namespace: zebrafish_anatomy
synonym: "motor nucleus VI" RELATED []
synonym: "nVI" RELATED []
xref: ZFIN:ZDB-ANAT-011113-96
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000714
name: accessory pretectal nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-97
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000183 ! central pretectum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000715
name: adductor hyohyoid
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-011113-98
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000521 ! hyoid muscle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000716
name: afferent branchial artery
namespace: zebrafish_anatomy
synonym: "ABA" RELATED []
xref: ZFIN:ZDB-ANAT-011113-99
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000354 ! gill
relationship: part_of ZFA:0005003 ! pharyngeal vasculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000717
name: apical ectodermal ridge median fin fold
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-1
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000040 ! median fin fold
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000718
name: epaxial region somite 27
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-10
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000931 ! myotome somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000719
name: slow muscle cell somite 21
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 21" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-100
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000929 ! myotome somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000720
name: slow muscle cell somite 24
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 24" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-101
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000930 ! myotome somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000721
name: slow muscle cell somite 27
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 27" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-102
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000931 ! myotome somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000722
name: slow muscle cell somite 3
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 3" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-103
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000932 ! myotome somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000723
name: slow muscle cell somite 5
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 5" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-104
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000933 ! myotome somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000724
name: slow muscle cell somite 8
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 8" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-105
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000934 ! myotome somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000725
name: somite 11
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-106
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000726
name: somite 14
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-107
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000727
name: somite 17
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-108
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000728
name: somite 2
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-109
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000729
name: epaxial region somite 3
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-11
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000932 ! myotome somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000730
name: somite 23
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-110
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000731
name: somite 27
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-111
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000732
name: somite 3
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-112
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000733
name: somite 7
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-113
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000734
name: specialized centra/vertebra
namespace: zebrafish_anatomy
synonym: "specialized centra/vertebrae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-114
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0000735
name: hemal postzygapophyses
namespace: zebrafish_anatomy
def: "Paired, ventromedially directed processes on the posterior ends of the centra, ligamentously joined to the hemal postzygapophyses of the immediately posterior vertebra. The most posterior caudal vertebrae lack hemal postzygapophyses." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-4
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000126 ! centrum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000736
name: apical ectodermal ridge pectoral fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-116
relationship: develops_from ZFA:0000085 ! apical ectodermal ridge pectoral fin bud
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001161 ! pectoral fin
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0000737
name: cranial skeleton
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-117
is_a: ZFA:0000434 ! skeletal system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000738
name: dorsal oblique extraocular muscle
namespace: zebrafish_anatomy
synonym: "dorsal oblique extraocular muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-118
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000511 ! extraocular musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000739
name: epaxial region somite 11
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-119
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000801 ! myotome somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000740
name: epaxial region somite 5
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-12
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000933 ! myotome somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000741
name: epaxial region somite 14
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-120
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000044 ! myotome somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000742
name: epaxial region somite 17
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-121
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001015 ! myotome somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000743
name: epaxial region somite 2
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-122
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001016 ! myotome somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000744
name: epaxial region somite 22
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-123
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001017 ! myotome somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000745
name: epaxial region somite 25
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-124
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001018 ! myotome somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000746
name: epaxial region somite 28
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-125
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001019 ! myotome somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000747
name: epaxial region somite 30
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-126
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001020 ! myotome somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000748
name: epaxial region somite 6
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-127
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001021 ! myotome somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000749
name: epaxial region somite 9
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-128
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001022 ! myotome somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000750
name: fast muscle cell somite 10
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 10" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-129
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001013 ! myotome somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000751
name: epaxial region somite 8
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-13
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000934 ! myotome somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000752
name: fast muscle cell somite 13
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 13" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-130
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001014 ! myotome somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000753
name: fast muscle cell somite 16
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 16" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-131
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000927 ! myotome somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000754
name: fast muscle cell somite 19
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 19" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-132
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000928 ! myotome somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000755
name: fast muscle cell somite 21
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 21" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-133
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000929 ! myotome somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000756
name: fast muscle cell somite 24
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 24" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-134
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000930 ! myotome somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000757
name: fast muscle cell somite 27
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 27" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-135
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000931 ! myotome somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000758
name: fast muscle cell somite 3
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 3" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-136
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000932 ! myotome somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000759
name: fast muscle cell somite 5
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 5" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-137
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000933 ! myotome somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000760
name: fast muscle cell somite 8
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 8" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-138
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000934 ! myotome somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000761
name: basal plate midbrain
namespace: zebrafish_anatomy
synonym: "floor plate midbrain" RELATED []
synonym: "floorplate midbrain" RELATED []
xref: ZFIN:ZDB-ANAT-020309-139
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000128 ! midbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000762
name: facio-acoustic neural crest
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-14
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0001194 ! cranial neural crest
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000763
name: floor plate rhombomere 2
namespace: zebrafish_anatomy
synonym: "floor plate r2" RELATED []
synonym: "floorplate r2" RELATED []
xref: ZFIN:ZDB-ANAT-020309-140
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000822 ! rhombomere 2
relationship: part_of ZFA:0001258 ! floor plate hindbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000764
name: floor plate rhombomere 5
namespace: zebrafish_anatomy
synonym: "floor plate r5" RELATED []
synonym: "floorplate r5" RELATED []
xref: ZFIN:ZDB-ANAT-020309-141
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000823 ! rhombomere 5
relationship: part_of ZFA:0001258 ! floor plate hindbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000765
name: floor plate rhombomere 8
namespace: zebrafish_anatomy
synonym: "floor plate r8" RELATED []
synonym: "floorplate r8" RELATED []
xref: ZFIN:ZDB-ANAT-020309-142
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000153 ! rhombomere 8
relationship: part_of ZFA:0001258 ! floor plate hindbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000766
name: granular layer valvula cerebelli
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-143
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000603 ! valvula cerebelli
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000767
name: hypaxial region somite 11
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-144
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000801 ! myotome somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000768
name: hypaxial region somite 14
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-145
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000044 ! myotome somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000769
name: hypaxial region somite 17
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-146
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001015 ! myotome somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000770
name: hypaxial region somite 2
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-147
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001016 ! myotome somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000771
name: hypaxial region somite 22
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-148
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001017 ! myotome somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000772
name: hypaxial region somite 25
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-149
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001018 ! myotome somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000773
name: fast muscle cell somite 12
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 12" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-15
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000926 ! myotome somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000774
name: hypaxial region somite 28
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-150
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001019 ! myotome somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000775
name: hypaxial region somite 30
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-151
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001020 ! myotome somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000776
name: hypaxial region somite 6
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-152
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001021 ! myotome somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000777
name: hypaxial region somite 9
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-153
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001022 ! myotome somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000778
name: interneuron spinal cord
namespace: zebrafish_anatomy
synonym: "interneurons spinal cord" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-154
is_a: ZFA:0009248 ! neuron
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000779
name: lateral forebrain bundle telencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-155
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000597 ! telencephalic tracts
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000780
name: lateral wall diencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-156
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000781
name: lateral wall rhombomere 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-157
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001031 ! rhombomere 1
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000782
name: lateral wall rhombomere 4
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-158
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001032 ! rhombomere 4
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000783
name: lateral wall rhombomere 7
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-159
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000949 ! rhombomere 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000784
name: fast muscle cell somite 15
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 15" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-16
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000802 ! myotome somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000785
name: lateral wall telencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-160
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000079 ! telencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000786
name: medial migration pathway mesenchyme
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-161
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000787
name: mesenchyme derived from head neural crest
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-162
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0000113 ! head mesenchyme
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000788
name: mesenchyme dorsal fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-163
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001173 ! dorsal fin
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000789
name: mesoderm pectoral fin bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-164
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: part_of ZFA:0000141 ! pectoral fin bud
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000790
name: muscle pioneer somite 10
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 10" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-165
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001047 ! slow muscle cell somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000791
name: muscle pioneer somite 13
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 13" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-166
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001048 ! slow muscle cell somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000792
name: muscle pioneer somite 16
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 16" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-167
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001049 ! slow muscle cell somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000793
name: muscle pioneer somite 19
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 19" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-168
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001050 ! slow muscle cell somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000794
name: muscle pioneer somite 22
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 22" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-169
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000844 ! slow muscle cell somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000795
name: fast muscle cell somite 18
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 18" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-17
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000803 ! myotome somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000796
name: muscle pioneer somite 25
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 25" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-170
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000845 ! slow muscle cell somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000797
name: muscle pioneer somite 28
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 28" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-171
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000846 ! slow muscle cell somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000798
name: muscle pioneer somite 30
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 30" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-172
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000847 ! slow muscle cell somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000799
name: muscle pioneer somite 6
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 6" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-173
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000848 ! slow muscle cell somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000800
name: muscle pioneer somite 9
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 9" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-174
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000850 ! slow muscle cell somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000801
name: myotome somite 11
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-175
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000725 ! somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000802
name: myotome somite 15
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-176
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000852 ! somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000803
name: myotome somite 18
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-177
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000853 ! somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000804
name: myotome somite 20
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-178
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000156 ! somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000805
name: myotome somite 23
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-179
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000730 ! somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000806
name: fast muscle cell somite 20
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 20" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-18
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000804 ! myotome somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000807
name: myotome somite 26
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-180
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000074 ! somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000808
name: myotome somite 29
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-181
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000981 ! somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000809
name: myotome somite 4
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-182
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000857 ! somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000810
name: myotome somite 7
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-183
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000733 ! somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000811
name: neural crest diencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-184
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0000101 ! diencephalon
relationship: part_of ZFA:0001194 ! cranial neural crest
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000812
name: neural crest telencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-185
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0000079 ! telencephalon
relationship: part_of ZFA:0001194 ! cranial neural crest
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000813
name: neuromast infraorbital
namespace: zebrafish_anatomy
def: "Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromasts infraorbital" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-186
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000524 ! infraorbital lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000814
name: neuromast opercular
namespace: zebrafish_anatomy
def: "Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromasts opercular" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-187
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000424 ! opercular lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000815
name: nucleus of the medial longitudinal fasciculus medulla oblongata
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-188
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000816
name: oral epithelium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-189
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000590 ! oral region
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0000817
name: fast muscle cell somite 23
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 23" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-19
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000805 ! myotome somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000818
name: vagal neural crest
namespace: zebrafish_anatomy
def: "Vagal neural crest is adjacent to the first seven somites gives rise to both ganglionic and ectomesenchymal derivatives." [ZFIN:curator]
synonym: "post-otic neural crest" RELATED []
xref: ZFIN:ZDB-ANAT-060816-2
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001024 ! trunk neural crest
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000819
name: postcommissural nucleus of V central entopeduncular nucleus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-191
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000304 ! ventral telencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000820
name: presumptive neuron neural tube
namespace: zebrafish_anatomy
synonym: "presumptive neurons neural tube" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-192
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: part_of ZFA:0001135 ! neural tube
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000821
name: primary neuron hindbrain
namespace: zebrafish_anatomy
synonym: "primary neurons hindbrain" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-195
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000569 ! presumptive hindbrain
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000822
name: rhombomere 2
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r2" RELATED []
xref: ZFIN:ZDB-ANAT-020309-196
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001208 ! presumptive rhombomere 2
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000823
name: rhombomere 5
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r5" RELATED []
xref: ZFIN:ZDB-ANAT-020309-197
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001211 ! presumptive rhombomere 5
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000824
name: roof plate rhombomere 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-198
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000822 ! rhombomere 2
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000825
name: roof plate rhombomere 6
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-199
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000069 ! rhombomere 6
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000826
name: central nucleus torus semicircularis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-2
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000599 ! torus semicircularis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000827
name: fast muscle cell somite 26
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 26" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-20
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000807 ! myotome somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000828
name: roof plate rhombomere 5
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-200
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000823 ! rhombomere 5
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000829
name: sclerotome somite 11
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-201
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000725 ! somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000830
name: sclerotome somite 14
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-202
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000726 ! somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000831
name: sclerotome somite 17
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-203
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000727 ! somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000832
name: sclerotome somite 2
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-204
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000728 ! somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000833
name: sclerotome somite 22
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-205
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000978 ! somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000834
name: sclerotome somite 25
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-206
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000980 ! somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000835
name: sclerotome somite 28
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-207
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000856 ! somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000836
name: sclerotome somite 30
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-208
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000157 ! somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000837
name: sclerotome somite 6
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-209
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000982 ! somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000838
name: fast muscle cell somite 29
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 29" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-21
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000808 ! myotome somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000839
name: sclerotome somite 9
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-210
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000983 ! somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000840
name: slow muscle cell somite 11
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 11" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-211
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000801 ! myotome somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000841
name: slow muscle cell somite 14
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 14" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-212
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000044 ! myotome somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000842
name: slow muscle cell somite 17
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 17" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-213
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001015 ! myotome somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000843
name: slow muscle cell somite 2
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 2" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-214
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001016 ! myotome somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000844
name: slow muscle cell somite 22
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 22" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-215
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001017 ! myotome somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000845
name: slow muscle cell somite 25
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 25" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-216
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001018 ! myotome somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000846
name: slow muscle cell somite 28
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 28" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-217
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001019 ! myotome somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000847
name: slow muscle cell somite 30
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 30" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-218
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001020 ! myotome somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000848
name: slow muscle cell somite 6
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 6" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-219
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001021 ! myotome somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000849
name: fast muscle cell somite 4
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 4" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-22
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000809 ! myotome somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000850
name: slow muscle cell somite 9
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 9" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-220
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001022 ! myotome somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000851
name: somite 12
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-221
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000852
name: somite 15
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-222
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000853
name: somite 18
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-223
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000854
name: somite 21
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-224
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000855
name: somite 24
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-225
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000856
name: somite 28
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-226
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000857
name: somite 4
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-227
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000858
name: somite 8
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-228
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000859
name: specialized hemal arch and spine
namespace: zebrafish_anatomy
synonym: "ha(pu)" RELATED []
synonym: "hemal arches (preural)" RELATED [ZFIN:ZDB-PUB-011008-1]
synonym: "specialized hemal arches and spines" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-229
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000862 ! caudal fin skeleton
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000860
name: fast muscle cell somite 7
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 7" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-23
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000810 ! myotome somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000861
name: ventral oblique extraocular muscle
namespace: zebrafish_anatomy
synonym: "ventral oblique extraocular muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-230
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000511 ! extraocular musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000862
name: caudal fin skeleton
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-231
is_a: ZFA:0001123 ! median fin skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001058 ! caudal fin
relationship: part_of ZFA:0001117 ! tail
relationship: start ZFS:0000037 ! Larval:Day 5
[Term]
id: ZFA:0000863
name: dermatocranium
namespace: zebrafish_anatomy
def: "Cranial bones that are dermally derived." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-232
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000737 ! cranial skeleton
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000864
name: epaxial region somite 1
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-233
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000924 ! myotome somite 1
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000865
name: epaxial region somite 12
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-234
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000926 ! myotome somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000866
name: epaxial region somite 15
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-235
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000802 ! myotome somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000867
name: epaxial region somite 18
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-236
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000803 ! myotome somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000868
name: epaxial region somite 20
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-237
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000804 ! myotome somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000869
name: epaxial region somite 23
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-238
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000805 ! myotome somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000870
name: epaxial region somite 26
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-239
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000807 ! myotome somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000871
name: floor plate diencephalon
namespace: zebrafish_anatomy
synonym: "floorplate diencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-020309-24
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000872
name: epaxial region somite 29
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-240
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000808 ! myotome somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000873
name: epaxial region somite 4
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-241
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000809 ! myotome somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000874
name: epaxial region somite 7
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-242
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000810 ! myotome somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000875
name: facial neural crest
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-243
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0001194 ! cranial neural crest
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000876
name: fast muscle cell somite 11
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 11" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-244
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000801 ! myotome somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000877
name: fast muscle cell somite 14
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 14" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-245
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000044 ! myotome somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000878
name: fast muscle cell somite 17
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 17" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-246
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001015 ! myotome somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000879
name: fast muscle cell somite 2
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 2" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-247
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001016 ! myotome somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000880
name: fast muscle cell somite 22
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 22" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-248
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001017 ! myotome somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000881
name: fast muscle cell somite 25
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 25" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-249
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001018 ! myotome somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000882
name: floor plate rhombomere 1
namespace: zebrafish_anatomy
synonym: "floor plate r1" RELATED []
xref: ZFIN:ZDB-ANAT-020309-25
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001031 ! rhombomere 1
relationship: part_of ZFA:0001258 ! floor plate hindbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000883
name: fast muscle cell somite 28
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 28" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-250
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001019 ! myotome somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000884
name: fast muscle cell somite 30
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 30" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-251
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001020 ! myotome somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000885
name: fast muscle cell somite 6
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 6" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-252
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001021 ! myotome somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000886
name: fast muscle cell somite 9
namespace: zebrafish_anatomy
synonym: "fast muscle cells somite 9" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-253
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001022 ! myotome somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000887
name: floor plate neural rod
namespace: zebrafish_anatomy
synonym: "floorplate neural rod" RELATED []
xref: ZFIN:ZDB-ANAT-020309-254
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: part_of ZFA:0000133 ! neural rod
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000888
name: floor plate rhombomere 3
namespace: zebrafish_anatomy
synonym: "floor plate r3" RELATED []
synonym: "floorplate r3" RELATED []
xref: ZFIN:ZDB-ANAT-020309-255
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000948 ! rhombomere 3
relationship: part_of ZFA:0001258 ! floor plate hindbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000889
name: floor plate rhombomere 6
namespace: zebrafish_anatomy
synonym: "floor plate r6" RELATED []
synonym: "floorplate r6" RELATED []
xref: ZFIN:ZDB-ANAT-020309-256
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000069 ! rhombomere 6
relationship: part_of ZFA:0001258 ! floor plate hindbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000890
name: floor plate spinal cord
namespace: zebrafish_anatomy
synonym: "floorplate spinal cord" RELATED []
xref: ZFIN:ZDB-ANAT-020309-257
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000891
name: hypaxial region somite 1
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-258
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000924 ! myotome somite 1
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000892
name: hypaxial region somite 12
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-259
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000926 ! myotome somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000893
name: floor plate rhombomere 4
namespace: zebrafish_anatomy
synonym: "floor plate r4" RELATED []
synonym: "floorplate r4" RELATED []
xref: ZFIN:ZDB-ANAT-020309-26
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001032 ! rhombomere 4
relationship: part_of ZFA:0001258 ! floor plate hindbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000894
name: hypaxial region somite 15
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-260
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000802 ! myotome somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000895
name: hypaxial region somite 18
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-261
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000803 ! myotome somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000896
name: hypaxial region somite 20
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-262
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000804 ! myotome somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000897
name: hypaxial region somite 23
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-263
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000805 ! myotome somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000898
name: hypaxial region somite 26
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-264
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000807 ! myotome somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000899
name: hypaxial region somite 29
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-265
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000808 ! myotome somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000900
name: hypaxial region somite 4
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-266
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000809 ! myotome somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000901
name: hypaxial region somite 7
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-267
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000810 ! myotome somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000902
name: hypural musculature
namespace: zebrafish_anatomy
synonym: "hypural muscles" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-268
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000628 ! caudal fin musculature
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000903
name: interpeduncular nucleus tegmentum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-269
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000904
name: floor plate rhombomere 7
namespace: zebrafish_anatomy
synonym: "floor plate r7" RELATED []
synonym: "floorplate r7" RELATED []
xref: ZFIN:ZDB-ANAT-020309-27
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000949 ! rhombomere 7
relationship: part_of ZFA:0001258 ! floor plate hindbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000905
name: lateral mesenchyme derived from mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-270
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000081 ! trunk mesenchyme
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000906
name: lateral wall midbrain
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-271
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000128 ! midbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000907
name: lateral wall rhombomere 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-272
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000822 ! rhombomere 2
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000908
name: lateral wall rhombomere 5
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-273
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000823 ! rhombomere 5
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000909
name: lateral wall rhombomere 8
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-274
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000153 ! rhombomere 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000910
name: medial forebrain bundle telencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-275
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000597 ! telencephalic tracts
relationship: part_of ZFA:0005111 ! medial forebrain bundle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000911
name: medial pterygiophores dorsal fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-276
is_obsolete: true
[Term]
id: ZFA:0000912
name: mesenchyme median fin fold
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-278
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000040 ! median fin fold
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0000913
name: molecular layer valvula cerebelli
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-279
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000603 ! valvula cerebelli
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000914
name: floor plate telencephalon
namespace: zebrafish_anatomy
synonym: "floorplate telencephalon" RELATED []
xref: ZFIN:ZDB-ANAT-020309-28
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000079 ! telencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000915
name: muscle pioneer somite 11
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 11" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-280
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000840 ! slow muscle cell somite 11
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000916
name: muscle pioneer somite 14
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 14" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-281
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000841 ! slow muscle cell somite 14
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000917
name: muscle pioneer somite 17
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 17" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-282
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000842 ! slow muscle cell somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000918
name: muscle pioneer somite 20
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 20" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-283
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000967 ! slow muscle cell somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000919
name: muscle pioneer somite 23
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 23" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-284
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000969 ! slow muscle cell somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000920
name: muscle pioneer somite 26
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 26" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-285
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000970 ! slow muscle cell somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000921
name: muscle pioneer somite 29
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 29" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-286
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000971 ! slow muscle cell somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000922
name: muscle pioneer somite 4
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 4" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-287
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000972 ! slow muscle cell somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000923
name: muscle pioneer somite 7
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 7" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-288
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000973 ! slow muscle cell somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000924
name: myotome somite 1
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-289
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000072 ! somite 1
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000925
name: hypaxial region somite 10
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-29
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001013 ! myotome somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000926
name: myotome somite 12
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-290
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000851 ! somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000927
name: myotome somite 16
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-291
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000976 ! somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000928
name: myotome somite 19
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-292
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000977 ! somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000929
name: myotome somite 21
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-293
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000854 ! somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000930
name: myotome somite 24
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-294
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000855 ! somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000931
name: myotome somite 27
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-295
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000731 ! somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000932
name: myotome somite 3
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-296
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000732 ! somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000933
name: myotome somite 5
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-297
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000073 ! somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000934
name: myotome somite 8
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-298
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000858 ! somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000935
name: neural crest midbrain
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-299
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: part_of ZFA:0001194 ! cranial neural crest
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000936
name: dorsal fin distal radial
namespace: zebrafish_anatomy
def: "Rod-like internal median skeletal support bones of the dorsal fin, which articulate with the lepidotrichia distally." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-3
is_a: ZFA:0001419 ! dorsal fin radial
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000937
name: hypaxial region somite 13
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-30
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001014 ! myotome somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000938
name: central canal
namespace: zebrafish_anatomy
synonym: "neural lumen" RELATED []
xref: ZFIN:ZDB-ANAT-020309-300
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000939
name: neuromast middle
namespace: zebrafish_anatomy
def: "Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromasts middle" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-301
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000344 ! middle lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0000940
name: neuromast posterior
namespace: zebrafish_anatomy
def: "Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromasts posterior" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-302
is_a: ZFA:0000243 ! neuromast
relationship: develops_from ZFA:0001157 ! posterior lateral line primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000944 ! posterior lateral line
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000941
name: nucleus of the medial longitudinal fasciculus synencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-303
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000293 ! synencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000942
name: paraxial mesenchyme
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-304
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000081 ! trunk mesenchyme
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000943
name: pectoral fin skeleton
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-305
is_a: ZFA:0000027 ! paired fin skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001161 ! pectoral fin
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000944
name: posterior lateral line
namespace: zebrafish_anatomy
def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "pll" RELATED []
xref: ZFIN:ZDB-ANAT-020309-306
is_a: ZFA:0001469 ! lateral line
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001471 ! posterior lateral line system
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0000946
name: hypaxial region somite 16
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-31
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000927 ! myotome somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000947
name: dorsal fin proximal radial
namespace: zebrafish_anatomy
def: "Rod-like internal median skeletal support bones of the dorsal fin, which articulate with the distal radials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-310
is_a: ZFA:0001419 ! dorsal fin radial
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000948
name: rhombomere 3
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r3" RELATED []
xref: ZFIN:ZDB-ANAT-020309-311
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001213 ! presumptive rhombomere 3
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000949
name: rhombomere 7
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r7" RELATED []
xref: ZFIN:ZDB-ANAT-020309-312
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001209 ! presumptive rhombomere 7
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000950
name: roof plate rhombomere 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-313
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000948 ! rhombomere 3
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000951
name: roof plate rhombomere 7
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-314
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000949 ! rhombomere 7
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000952
name: sclerotome somite 1
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-315
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000072 ! somite 1
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0000953
name: sclerotome somite 12
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-316
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000851 ! somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000954
name: sclerotome somite 15
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-317
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000852 ! somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000955
name: sclerotome somite 18
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-318
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000853 ! somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000956
name: sclerotome somite 20
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-319
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000156 ! somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000957
name: hypaxial region somite 19
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-32
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000928 ! myotome somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000958
name: sclerotome somite 23
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-320
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000730 ! somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000959
name: sclerotome somite 26
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-321
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000074 ! somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000960
name: sclerotome somite 29
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-322
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000981 ! somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000961
name: sclerotome somite 4
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-323
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000857 ! somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000962
name: sclerotome somite 7
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-324
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000733 ! somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000963
name: slow muscle cell somite 1
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 1" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-325
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000924 ! myotome somite 1
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000964
name: slow muscle cell somite 12
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 12" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-326
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000926 ! myotome somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000965
name: slow muscle cell somite 15
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 15" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-327
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000802 ! myotome somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000966
name: slow muscle cell somite 18
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 18" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-328
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000803 ! myotome somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000967
name: slow muscle cell somite 20
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 20" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-329
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000804 ! myotome somite 20
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000968
name: hypaxial region somite 21
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-33
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000929 ! myotome somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000969
name: slow muscle cell somite 23
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 23" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-330
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000805 ! myotome somite 23
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000970
name: slow muscle cell somite 26
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 26" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-331
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000807 ! myotome somite 26
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000971
name: slow muscle cell somite 29
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 29" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-332
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000808 ! myotome somite 29
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000972
name: slow muscle cell somite 4
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 4" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-333
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000809 ! myotome somite 4
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000973
name: slow muscle cell somite 7
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 7" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-334
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000810 ! myotome somite 7
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000974
name: somite 10
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-335
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000975
name: somite 13
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-336
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0000976
name: somite 16
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-337
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000977
name: somite 19
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-338
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0000978
name: somite 22
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-339
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000979
name: hypaxial region somite 24
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-34
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000930 ! myotome somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000980
name: somite 25
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-340
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0000981
name: somite 29
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-341
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000982
name: somite 6
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-342
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000983
name: somite 9
namespace: zebrafish_anatomy
def: "Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-343
is_a: ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000984
name: superior reticular formation tegmentum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-344
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000160 ! tegmentum
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000985
name: ventral rhombencephalic commissure medulla oblongata
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-345
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000986
name: hypaxial region somite 27
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-35
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000931 ! myotome somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000987
name: hypaxial region somite 3
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-36
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000932 ! myotome somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000988
name: hypaxial region somite 5
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-37
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000933 ! myotome somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000989
name: hypaxial region somite 8
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-38
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000934 ! myotome somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000990
name: intermediate mesenchyme
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-39
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000081 ! trunk mesenchyme
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000991
name: epaxial region somite 10
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-4
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001013 ! myotome somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000992
name: lateral migration pathway mesenchyme
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-41
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000993
name: lateral wall neural rod
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-42
relationship: end ZFS:0000026 ! Segmentation:14-19 somites
relationship: part_of ZFA:0000133 ! neural rod
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000994
name: lateral wall rhombomere 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-43
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000948 ! rhombomere 3
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000995
name: lateral wall rhombomere 6
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-44
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000069 ! rhombomere 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0000996
name: lateral wall spinal cord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-45
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0000997
name: medial funicular nucleus trigeminal nuclei
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-46
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000433 ! sensory trigeminal nuclei
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0000998
name: mesenchyme derived from head mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-47
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000113 ! head mesenchyme
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0000999
name: mesenchyme derived from trunk neural crest
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-48
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000942 ! paraxial mesenchyme
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001000
name: mesenchyme pectoral fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-49
relationship: develops_from ZFA:0000789 ! mesoderm pectoral fin bud
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001161 ! pectoral fin
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001001
name: epaxial region somite 13
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-5
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001014 ! myotome somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001002
name: motor axons peripheral
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-50
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001003
name: muscle pioneer somite 12
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 12" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-51
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000964 ! slow muscle cell somite 12
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001004
name: muscle pioneer somite 15
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 15" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-52
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000965 ! slow muscle cell somite 15
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001005
name: muscle pioneer somite 18
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 18" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-53
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000966 ! slow muscle cell somite 18
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001006
name: muscle pioneer somite 21
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 21" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-54
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000719 ! slow muscle cell somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001007
name: muscle pioneer somite 24
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 24" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-55
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000720 ! slow muscle cell somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001008
name: muscle pioneer somite 27
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 27" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-56
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000721 ! slow muscle cell somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001009
name: muscle pioneer somite 3
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 3" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-57
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000722 ! slow muscle cell somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001010
name: muscle pioneer somite 5
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 5" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-58
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000723 ! slow muscle cell somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001011
name: muscle pioneer somite 8
namespace: zebrafish_anatomy
synonym: "muscle pioneers somite 8" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-59
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000724 ! slow muscle cell somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001012
name: epaxial region somite 16
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-6
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000927 ! myotome somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001013
name: myotome somite 10
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-60
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000974 ! somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001014
name: myotome somite 13
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-61
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000975 ! somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001015
name: myotome somite 17
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-62
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000727 ! somite 17
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001016
name: myotome somite 2
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-63
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000728 ! somite 2
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001017
name: myotome somite 22
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-64
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000978 ! somite 22
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001018
name: myotome somite 25
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-65
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000980 ! somite 25
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001019
name: myotome somite 28
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-66
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000856 ! somite 28
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001020
name: myotome somite 30
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-67
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000157 ! somite 30
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001021
name: myotome somite 6
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-68
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000982 ! somite 6
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001022
name: myotome somite 9
namespace: zebrafish_anatomy
def: "Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-69
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000983 ! somite 9
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001023
name: epaxial region somite 19
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-7
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000928 ! myotome somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001024
name: trunk neural crest
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-70
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000045 ! neural crest
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001025
name: neuromast occipital
namespace: zebrafish_anatomy
def: "Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromasts occipital" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-72
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000400 ! occipital lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0001026
name: neuromast supraorbital
namespace: zebrafish_anatomy
def: "Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)" [ZFIN:curator]
synonym: "neuromasts supraorbital" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-73
is_a: ZFA:0000243 ! neuromast
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000443 ! supraorbital lateral line
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0001027
name: oral cavity
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-74
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000590 ! oral region
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001028
name: hypurapophysis
namespace: zebrafish_anatomy
def: "The paired bony lateral extensions off the hemal arch of the parhypural. Mabee and Bird, 2001." [ZFIN:curator]
synonym: "hypurapophyses" RELATED PLURAL []
synonym: "parhypurapophyses" RELATED []
synonym: "parhypurapophyses processes" RELATED []
xref: ZFIN:ZDB-ANAT-020309-75
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000859 ! specialized hemal arch and spine
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001029
name: inner limiting membrane
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-061101-7
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001030
name: epaxial region somite 21
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-8
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000929 ! myotome somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001031
name: rhombomere 1
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r1" RELATED []
xref: ZFIN:ZDB-ANAT-020309-81
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001207 ! presumptive rhombomere 1
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001032
name: rhombomere 4
namespace: zebrafish_anatomy
def: "Hindbrain segment or neuromere. Kimmel et al, 1995." [ZFIN:curator]
synonym: "r4" RELATED []
xref: ZFIN:ZDB-ANAT-020309-82
is_a: ZFA:0001064 ! rhombomere
relationship: develops_from ZFA:0001212 ! presumptive rhombomere 4
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001033
name: roof plate rhombomere 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-83
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001031 ! rhombomere 1
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001034
name: roof plate rhombomere 4
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-84
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001032 ! rhombomere 4
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001035
name: roof plate rhombomere 8
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020309-85
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000153 ! rhombomere 8
relationship: part_of ZFA:0001311 ! roof plate rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001036
name: sclerotome somite 10
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-86
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000974 ! somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001037
name: sclerotome somite 13
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-87
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000975 ! somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001038
name: sclerotome somite 16
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-88
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000976 ! somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001039
name: sclerotome somite 19
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-89
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000977 ! somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001040
name: epaxial region somite 24
namespace: zebrafish_anatomy
def: "Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-9
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000930 ! myotome somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001041
name: sclerotome somite 21
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-90
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000854 ! somite 21
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001042
name: sclerotome somite 24
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-91
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000855 ! somite 24
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001043
name: sclerotome somite 27
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-92
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000731 ! somite 27
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001044
name: sclerotome somite 3
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-93
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000732 ! somite 3
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001045
name: sclerotome somite 5
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-94
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000073 ! somite 5
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001046
name: sclerotome somite 8
namespace: zebrafish_anatomy
def: "Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-020309-95
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000858 ! somite 8
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001047
name: slow muscle cell somite 10
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 10" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-96
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001013 ! myotome somite 10
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001048
name: slow muscle cell somite 13
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 13" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-97
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001014 ! myotome somite 13
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001049
name: slow muscle cell somite 16
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 16" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-98
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000927 ! myotome somite 16
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001050
name: slow muscle cell somite 19
namespace: zebrafish_anatomy
synonym: "slow muscle cells somite 19" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020309-99
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0000928 ! myotome somite 19
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001051
name: caudal division of the internal carotid artery
namespace: zebrafish_anatomy
synonym: "CaDI" RELATED []
xref: ZFIN:ZDB-ANAT-020702-1
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0005081 ! internal carotid artery
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001052
name: primordial hindbrain channel
namespace: zebrafish_anatomy
def: "The paired vessels that run along the lateral walls of the hindbrain and drain into the anterior cardinal veins. Isogai et al. (2002)" [ZFIN:curator]
synonym: "medial head vein" RELATED []
synonym: "PHCB" RELATED []
xref: ZFIN:ZDB-ANAT-020702-10
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001053
name: primitive internal carotid artery
namespace: zebrafish_anatomy
synonym: "PICA" RELATED []
xref: ZFIN:ZDB-ANAT-020702-11
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001054
name: lateral dorsal aorta
namespace: zebrafish_anatomy
def: "Connect the outflow of the aortic arches to the dorsal aorta. The place where the lateral dorsal aorta fuse is is called the radiax of the aorta. Isogai et al. 2001." [ZFIN:curator]
synonym: "LDA" RELATED []
xref: ZFIN:ZDB-ANAT-020702-12
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001055
name: pronephric duct opening
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020702-13
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000150 ! pronephric duct
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001056
name: myotome
namespace: zebrafish_anatomy
def: "Portion of the somites giving rise to body wall muscle masses. Kimmel et al, 1995." [ZFIN:curator]
synonym: "myomeres" RELATED [ZFIN:ZDB-PUB-961014-576]
xref: ZFIN:ZDB-ANAT-020702-14
relationship: develops_from ZFA:0000155 ! somite
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000473 ! body musculature
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001057
name: intersegmental vein
namespace: zebrafish_anatomy
def: "Primary intersegmental vessels that are contacted by secondary angiogenic sprouts from the posterior cardinal vein and take on the characteristics of veins. These eventually link with other secondary sprouts from the posterior cardinal vein to form the parachordal vessel. Isogai et al. 2003.'" [ZFIN:curator]
synonym: "ISV" RELATED []
xref: ZFIN:ZDB-ANAT-020702-15
is_a: ZFA:0000082 ! vein
is_a: ZFA:0001285 ! intersegmental vessel
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0001058
name: caudal fin
namespace: zebrafish_anatomy
synonym: "tail fin" RELATED []
xref: ZFIN:ZDB-ANAT-020702-16
is_a: ZFA:0000108 ! fin
relationship: develops_from ZFA:0001069 ! ventral fin fold
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001059
name: cranial division of the internal carotid artery
namespace: zebrafish_anatomy
synonym: "CrDI" RELATED []
synonym: "rostral division of the internal carotid artery" RELATED []
xref: ZFIN:ZDB-ANAT-020702-17
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0005081 ! internal carotid artery
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001060
name: basidorsal
namespace: zebrafish_anatomy
def: "Basidorsals are bilaterally paired cartilages on the dorsolateral side of the notochord which are replaced by ossified neural arches or dorsal arcocentra. In otophysan fishes, basidorsal 1, bd2, bd3, and bd4 give rise to parts of the Weberian apparatus." [ZFIN:curator]
synonym: "arcualia" RELATED []
xref: ZFIN:ZDB-ANAT-060331-5
relationship: end ZFS:0000039 ! Larval:Days 7-13
relationship: part_of ZFA:0001189 ! vertebrae
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001061
name: intersegmental artery
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020702-19
is_a: ZFA:0000005 ! artery
is_a: ZFA:0001285 ! intersegmental vessel
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0001062
name: primitive mesencephalic artery
namespace: zebrafish_anatomy
def: "Branches dorsally from the cranial division of the internal carotid artery, then curves caudally along the dorsal medial wall of the eye capsule to drain into the PMBC just rostral to the midbrain hindbrain boundary" [ZFIN:curator]
synonym: "PMsA" RELATED []
xref: ZFIN:ZDB-ANAT-020702-2
is_a: ZFA:0000005 ! artery
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001063
name: posterior caudal vein
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020702-20
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0005037 ! tail vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001064
name: rhombomere
namespace: zebrafish_anatomy
def: "A segment of the developing hindbrain. Kimmel et al, 1995." [ZFIN:curator]
synonym: "hindbrain segment" RELATED []
synonym: "neuromeres" RELATED []
synonym: "rhombomeres" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-020702-3
is_a: ZFA:0001328 ! neuromere
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000029 ! hindbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001065
name: lateral mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-020702-4
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001066
name: neural arch
namespace: zebrafish_anatomy
def: "A neural arch encloses the neural canal and typically meets its partner to form a neural spine. The neural arch can be a replacement ossification of the basidorsal cartilage or can form directly in membrane bone." [ZFIN:curator]
synonym: "dorsal arcocentrum" RELATED []
xref: ZFIN:ZDB-ANAT-060331-6
relationship: develops_from ZFA:0001060 ! basidorsal
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001189 ! vertebrae
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001067
name: anterior cerebral vein
namespace: zebrafish_anatomy
synonym: "ACeV" RELATED []
synonym: "rostral cerebral vein" RELATED []
xref: ZFIN:ZDB-ANAT-020702-6
is_a: ZFA:0000082 ! vein
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001267 ! cranial vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001068
name: mesencephalic artery
namespace: zebrafish_anatomy
def: "Develops from the proximal portion of the primitive mesencephalic artery. Isogai et al.2001." [ZFIN:curator]
synonym: "MsA" RELATED []
xref: ZFIN:ZDB-ANAT-020702-7
is_a: ZFA:0000005 ! artery
relationship: develops_from ZFA:0001062 ! primitive mesencephalic artery
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001069
name: ventral fin fold
namespace: zebrafish_anatomy
synonym: "tail fin fold" RELATED []
synonym: "ventral fin" RELATED []
xref: ZFIN:ZDB-ANAT-020702-8
relationship: end ZFS:0000037 ! Larval:Day 5
relationship: part_of ZFA:0000040 ! median fin fold
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001070
name: presumptive pronephric mesoderm
namespace: zebrafish_anatomy
synonym: "nephron primordium" RELATED []
xref: ZFIN:ZDB-ANAT-020702-9
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0001206 ! intermediate mesoderm
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001071
name: presumptive retina
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-1
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0000050 ! optic vesicle
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001072
name: thyroid follicle
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-10
relationship: develops_from ZFA:0001081 ! thyroid primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001073
name: axial vasculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-11
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001074
name: taste bud
namespace: zebrafish_anatomy
synonym: "taste buds" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-030922-12
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001101 ! gustatory system
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001075
name: choroid fissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-13
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001076
name: intestinal bulb
namespace: zebrafish_anatomy
def: "This anteriormost portion of the intestine has the most digestive enzymes and the greatest epithelial surface area. Wallace et al, 2005." [ZFIN:curator]
synonym: "anterior intestine" RELATED []
xref: ZFIN:ZDB-ANAT-030922-14
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001338 ! intestine
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001077
name: thymus primordium
namespace: zebrafish_anatomy
def: "A small outgrowth of the pharyngeal epithelium that is the site of lymphocyte cell production. Willett et al, 1999." [ZFIN:curator]
synonym: "thymic rudiment" RELATED []
xref: ZFIN:ZDB-ANAT-030922-2
relationship: develops_from ZFA:0000818 ! vagal neural crest
relationship: develops_from ZFA:0001104 ! pharyngeal endoderm
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001159 ! immune system
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001078
name: thymus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-3
relationship: develops_from ZFA:0001077 ! thymus primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001159 ! immune system
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001079
name: vasculature
namespace: zebrafish_anatomy
synonym: "blood vessels" RELATED []
synonym: "circulatory system" RELATED []
xref: ZFIN:ZDB-ANAT-030922-4
is_a: ZFA:0000496 ! organ
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000010 ! cardiovascular system
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001080
name: sclerotome
namespace: zebrafish_anatomy
synonym: "sclerotomes" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-030922-5
relationship: develops_from ZFA:0000155 ! somite
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001081
name: thyroid primordium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-6
relationship: develops_from ZFA:0001104 ! pharyngeal endoderm
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001082
name: chordo neural hinge
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-7
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000135 ! notochord
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001083
name: ventricular zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-030922-8
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001084
name: epaxial region
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-031211-12
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001056 ! myotome
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001085
name: hypaxial region
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-031211-13
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0001056 ! myotome
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001086
name: muscle pioneer
namespace: zebrafish_anatomy
synonym: "muscle pioneers" RELATED PLURAL []
synonym: "non migratory adaxial cells" RELATED []
xref: ZFIN:ZDB-ANAT-031211-14
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: part_of ZFA:0009116 ! slow muscle cell
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001089
name: myoseptum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-031211-5
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001056 ! myotome
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001093
name: unspecified
namespace: zebrafish_anatomy
def: "Annotation with this anatomy term indicates that a structure was not specified by the author." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-041102-1
is_a: ZFA:0100000 ! zebrafish anatomical entity
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0001094
name: whole organism
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-1
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0001095
name: immature macula
namespace: zebrafish_anatomy
synonym: "immature maculae" RELATED PLURAL []
synonym: "immature sensory patch" RELATED []
synonym: "immature sensory patches" RELATED []
xref: ZFIN:ZDB-ANAT-050228-10
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0000051 ! otic vesicle
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001096
name: immature anterior macula
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-11
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0001095 ! immature macula
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001097
name: immature posterior macula
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-12
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0001095 ! immature macula
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001098
name: immature sensory hair cell anterior macula
namespace: zebrafish_anatomy
synonym: "immature sensory hair cells anterior macula" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050228-13
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0001096 ! immature anterior macula
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001099
name: immature sensory hair cell posterior macula
namespace: zebrafish_anatomy
synonym: "immature sensory hair cells posterior macula" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050228-14
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0001097 ! immature posterior macula
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001100
name: hepatic duct
namespace: zebrafish_anatomy
def: "A duct that carries bile from the liver to the small intestine. Crump et al, 2004." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-20
relationship: develops_from ZFA:0001104 ! pharyngeal endoderm
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000056 ! pharynx
relationship: part_of ZFA:0001306 ! pharyngeal arch
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001107
name: internal gill bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-21
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000056 ! pharynx
relationship: start ZFS:0000036 ! Larval:Day 4
[Term]
id: ZFA:0001108
name: anterior commissure
namespace: zebrafish_anatomy
synonym: "commissura anterior" RELATED []
synonym: "commissura rostral" RELATED []
xref: ZFIN:ZDB-ANAT-050228-22
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000597 ! telencephalic tracts
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001109
name: oocyte
namespace: zebrafish_anatomy
synonym: "egg" RELATED []
synonym: "ovarian follicle stage V" RELATED []
xref: ZFIN:ZDB-ANAT-050228-23
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001110 ! ovarian follicle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001110
name: ovarian follicle
namespace: zebrafish_anatomy
def: "Oocyte development of zebrafish has been divided into five stages based on morphological criteria and on physiological and biochemical events. Stage I follicles (less than 140 microns) are primary growth stage, stage II follicles (140-340 microns) are cortical alveolus stage, stage III (340-690 microns) are vitellogenesis, stage IV (690-730 microns) are oocyte maturation, and stage V follicles are matured egg.Selman et al, 1993." [ZFIN:curator]
synonym: "egg follicle" RELATED []
xref: ZFIN:ZDB-ANAT-050228-24
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000403 ! ovary
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001111
name: zona radiata
namespace: zebrafish_anatomy
synonym: "vitelline envelope" RELATED []
xref: ZFIN:ZDB-ANAT-050228-25
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001110 ! ovarian follicle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001112
name: granulosa cell layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-26
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001110 ! ovarian follicle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001113
name: thecal cell layer
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-27
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001110 ! ovarian follicle
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001114
name: head
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-28
is_a: ZFA:0001308 ! cardinal organism part
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001115
name: trunk
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-29
is_a: ZFA:0001308 ! cardinal organism part
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001116
name: presumptive structure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-3
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0001117
name: tail
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-30
is_a: ZFA:0001308 ! cardinal organism part
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001118
name: urogenital papilla
namespace: zebrafish_anatomy
def: "A protuberance in front of the gential pore and behind the vent. Mature females have a well developed urogenital papillae whilst in mature males it is poorly developed. Brion et al, 2004." [ZFIN:curator]
synonym: "anal papilla" RELATED []
synonym: "anal papillae" RELATED []
synonym: "genital papilla" RELATED []
synonym: "UGP" RELATED []
synonym: "urogenital papillae" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050228-31
is_a: ZFA:0000292 ! surface structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000632 ! reproductive system
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001119
name: dermis
namespace: zebrafish_anatomy
def: "A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis. It contains various types of cells (e.g. fibroblasts, pigment cells, nerve, blood vessels and scales. Le Guellec et al, 2004." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-32
relationship: develops_from ZFA:0000255 ! paraxial mesoderm
relationship: develops_from ZFA:0000787 ! mesenchyme derived from head neural crest
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000368 ! integument
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001120
name: neuroectoderm
namespace: zebrafish_anatomy
synonym: "neurectoderm" RELATED []
xref: ZFIN:ZDB-ANAT-050228-33
relationship: end ZFS:0000038 ! Larval:Day 6
relationship: part_of ZFA:0000016 ! ectoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001121
name: presumptive shield
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-34
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000018 ! Gastrula:Germ-ring
relationship: start ZFS:0000016 ! Blastula:30%-epiboly
[Term]
id: ZFA:0001122
name: primary germ layer
namespace: zebrafish_anatomy
synonym: "embryonic germ layers" RELATED []
xref: ZFIN:ZDB-ANAT-050228-35
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000038 ! Larval:Day 6
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001123
name: median fin skeleton
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-36
is_a: ZFA:0000434 ! skeletal system
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000317 ! axial skeleton
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0001124
name: dorsal fin skeleton
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-37
is_a: ZFA:0001123 ! median fin skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001173 ! dorsal fin
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001125
name: organizer inducing center
namespace: zebrafish_anatomy
def: "The dorsal marginal region of the YSL where maternal dorsal determinants localize. Participates in positioning the shield. Ho et al, 1999." [ZFIN:curator]
synonym: "Nieuwkoop center" RELATED []
xref: ZFIN:ZDB-ANAT-050228-38
relationship: end ZFS:0000019 ! Gastrula:Shield
relationship: part_of ZFA:0000088 ! YSL
relationship: start ZFS:0000012 ! Blastula:High
[Term]
id: ZFA:0001126
name: noninvoluting endocytic marginal cell cluster
namespace: zebrafish_anatomy
def: "The NEM cell cluster lies in a superficial position of the dorsal blastoderm margin encompassing EVL cells and one or two layers of underlying deep cells. Unlike other marginal blastomeres, cells in this cluster do not participate in involution. Cooper et al, 1996." [ZFIN:curator]
synonym: "NEM" RELATED []
synonym: "noninvoluting endocytic marginal cells" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050228-39
relationship: end ZFS:0000017 ! Gastrula:50%-epiboly
relationship: part_of ZFA:0000038 ! margin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001127
name: visual system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-4
is_a: ZFA:0000282 ! sensory system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001128
name: pharyngeal pouch 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-40
is_a: ZFA:0001106 ! pharyngeal pouch
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001129
name: pharyngeal pouches 2-6
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-41
is_a: ZFA:0001106 ! pharyngeal pouch
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001130
name: pharyngeal pouch 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-42
is_a: ZFA:0001129 ! pharyngeal pouches 2-6
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001131
name: pharyngeal pouch 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-43
is_a: ZFA:0001129 ! pharyngeal pouches 2-6
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001132
name: pharyngeal pouch 6
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-44
is_a: ZFA:0001129 ! pharyngeal pouches 2-6
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001133
name: pharyngeal pouch 5
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-45
is_a: ZFA:0001129 ! pharyngeal pouches 2-6
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001134
name: pharyngeal pouch 4
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-46
is_a: ZFA:0001129 ! pharyngeal pouches 2-6
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001135
name: neural tube
namespace: zebrafish_anatomy
synonym: "presumptive central nervous system" RELATED []
xref: ZFIN:ZDB-ANAT-050228-47
relationship: develops_from ZFA:0000133 ! neural rod
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0001120 ! neuroectoderm
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001136
name: hypodermis
namespace: zebrafish_anatomy
def: "A layer separating the inner face of the dermis from the subjacent muscle cells. It is covered on both sides by a basement membrane. It contains pigment cells. Le Guellec et al, 2004." [ZFIN:curator]
synonym: "subcutis" RELATED []
xref: ZFIN:ZDB-ANAT-050228-48
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000368 ! integument
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001137
name: ventral tooth
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-49
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001138
name: vestibuloauditory system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-5
is_a: ZFA:0000282 ! sensory system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001139
name: mediodorsal tooth
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-50
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001140
name: dorsal tooth
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-51
is_a: ZFA:0000694 ! ceratobranchial 5 tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001141
name: tooth 1V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-52
is_a: ZFA:0001137 ! ventral tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001142
name: tooth 5V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-53
is_a: ZFA:0001137 ! ventral tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001143
name: tooth 4V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-54
is_a: ZFA:0001137 ! ventral tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001144
name: tooth 2V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-55
is_a: ZFA:0001137 ! ventral tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001145
name: tooth 3V
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-56
is_a: ZFA:0001137 ! ventral tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001146
name: tooth 1MD
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-57
is_a: ZFA:0001139 ! mediodorsal tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001147
name: tooth 2MD
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-58
is_a: ZFA:0001139 ! mediodorsal tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001148
name: tooth 1D
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-59
is_a: ZFA:0001140 ! dorsal tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001149
name: olfactory system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-6
is_a: ZFA:0000282 ! sensory system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001150
name: tooth 2D
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-60
is_a: ZFA:0001140 ! dorsal tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001151
name: tooth 4MD
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-61
is_a: ZFA:0001139 ! mediodorsal tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001152
name: tooth 3MD
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-62
is_a: ZFA:0001139 ! mediodorsal tooth
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001153
name: tooth placode
namespace: zebrafish_anatomy
synonym: "dental primordium" RELATED []
synonym: "tooth germ" RELATED []
xref: ZFIN:ZDB-ANAT-050228-63
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000056 ! pharynx
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001154
name: anal fin musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-64
is_a: ZFA:0000207 ! fin musculature
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001162 ! anal fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001155
name: enteric nervous system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-65
relationship: develops_from ZFA:0001334 ! presumptive enteric nervous system
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000396 ! nervous system
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001156
name: posterior lateral line placode
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-66
is_a: ZFA:0001310 ! dorsolateral placode
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0001471 ! posterior lateral line system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001157
name: posterior lateral line primordium
namespace: zebrafish_anatomy
def: "A migrating group of cells originating from the posterior lateral line placode. The primordium deposits seven to nine neuromasts and interneuromasts between them during its posterior migration to the tail. Gompel et al, 2001." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050228-67
is_a: ZFA:0000228 ! lateral line primordium
relationship: develops_from ZFA:0001156 ! posterior lateral line placode
relationship: end ZFS:0000036 ! Larval:Day 4
relationship: part_of ZFA:0001471 ! posterior lateral line system
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001158
name: endocrine system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-7
is_a: ZFA:0001439 ! organ system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001159
name: immune system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-8
is_a: ZFA:0001439 ! organ system
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001160
name: adult
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050228-9
is_obsolete: true
[Term]
id: ZFA:0001161
name: pectoral fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050304-1
is_a: ZFA:0000108 ! fin
relationship: develops_from ZFA:0000141 ! pectoral fin bud
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001162
name: anal fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-1
is_a: ZFA:0000108 ! fin
relationship: develops_from ZFA:0001069 ! ventral fin fold
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001163
name: supraneural 7
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-10
is_a: ZFA:0001397 ! post-Weberian supraneural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001164
name: supraneural 6
namespace: zebrafish_anatomy
synonym: "sn6" RELATED []
xref: ZFIN:ZDB-ANAT-050420-11
is_a: ZFA:0001397 ! post-Weberian supraneural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001165
name: supraneural 5
namespace: zebrafish_anatomy
synonym: "sn5" RELATED []
xref: ZFIN:ZDB-ANAT-050420-12
is_a: ZFA:0001397 ! post-Weberian supraneural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001166
name: supraneural 9
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-13
is_a: ZFA:0001397 ! post-Weberian supraneural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001167
name: vertebra 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-14
is_a: ZFA:0001190 ! Weberian vertebrae
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001168
name: vertebra 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-15
is_a: ZFA:0001190 ! Weberian vertebrae
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001169
name: vertebra 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-16
is_a: ZFA:0001190 ! Weberian vertebrae
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001170
name: vertebra 4
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-17
is_a: ZFA:0001190 ! Weberian vertebrae
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001171
name: os suspensorium
namespace: zebrafish_anatomy
def: "Separate ossification from the parapophysis of the fourth vertebra; develops ventrally to curve around the anterior head of the swim bladder. Often termed a fifth Weberian ossicle. Bird and Mabee, 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050420-18
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000461 ! Weberian ossicle
relationship: part_of ZFA:0001170 ! vertebra 4
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001172
name: roofing cartilage
namespace: zebrafish_anatomy
def: "Cartilaginous larval structure dorsal to the four anterior-most vertebrae, which forms the connection between neural arches and supraneurals in the Weberian apparatus. Bird and Mabee, 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050420-19
is_a: ZFA:0001457 ! axial cartilage
relationship: end ZFS:0000041 ! Larval:Days 21-29
relationship: part_of ZFA:0001191 ! supraneural 2
relationship: part_of ZFA:0001192 ! supraneural 3
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001173
name: dorsal fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-2
is_a: ZFA:0000108 ! fin
relationship: develops_from ZFA:0000102 ! dorsal fin fold
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001174
name: pharyngeal epithelium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-20
relationship: develops_from ZFA:0001104 ! pharyngeal endoderm
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000056 ! pharynx
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001175
name: blastodisc
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-21
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000015 ! Blastula:Dome
relationship: start ZFS:0000001 ! Zygote:1-cell
[Term]
id: ZFA:0001176
name: blastoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-22
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0001175 ! blastodisc
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: start ZFS:0000016 ! Blastula:30%-epiboly
[Term]
id: ZFA:0001177
name: roof plate spinal cord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-23
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001178
name: non neural ectoderm
namespace: zebrafish_anatomy
synonym: "ventral ectoderm" RELATED []
xref: ZFIN:ZDB-ANAT-050420-24
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: part_of ZFA:0000016 ! ectoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001179
name: epidermal superficial stratum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-25
relationship: develops_from ZFA:0001185 ! periderm
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000105 ! epidermis
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001180
name: epidermal basal stratum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-26
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000105 ! epidermis
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001181
name: epidermal intermediate stratum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-27
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000105 ! epidermis
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0001182
name: dermal deep region
namespace: zebrafish_anatomy
def: "Portion of the dermis characterized by a well-arranged, plywood-like, collagenous network. Le Guellec et al, 2004." [ZFIN:curator]
synonym: "stratum compactum" RELATED []
xref: ZFIN:ZDB-ANAT-050420-28
relationship: develops_from ZFA:0001186 ! collagenous dermal stroma
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001119 ! dermis
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0001183
name: dermal superficial region
namespace: zebrafish_anatomy
synonym: "stratum laxum" RELATED []
xref: ZFIN:ZDB-ANAT-050420-29
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001119 ! dermis
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001184
name: pelvic fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-3
is_a: ZFA:0000108 ! fin
relationship: develops_from ZFA:0001384 ! pelvic fin bud
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001185
name: periderm
namespace: zebrafish_anatomy
def: "The outermost epidermal layer covering the fish at embryonic stages; derived from the EVL and thought to eventually be replaced by the superficial stratum of the epidermis. Sometimes used synonymously with EVL. Le Guellec et al, 2004." [ZFIN:curator]
synonym: "EVL" RELATED []
xref: ZFIN:ZDB-ANAT-050420-30
relationship: develops_from ZFA:0000086 ! EVL
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0000016 ! ectoderm
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001186
name: collagenous dermal stroma
namespace: zebrafish_anatomy
def: "A layer of collagen fibrils present in the imature integument in an acellular subepidermal space. At first, the fibrils are all oriented in the same direction, later they form the complex plywood-like structure that is characteristic of the dermal deep region. Le Guellec et al, 2004." [ZFIN:curator]
synonym: "primary dermal stroma" RELATED []
xref: ZFIN:ZDB-ANAT-050420-31
relationship: end ZFS:0000041 ! Larval:Days 21-29
relationship: part_of ZFA:0001119 ! dermis
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001187
name: presumptive midbrain hindbrain boundary
namespace: zebrafish_anatomy
synonym: "MHB" RELATED []
xref: ZFIN:ZDB-ANAT-050420-32
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0000146 ! presumptive brain
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001188
name: Weberian apparatus
namespace: zebrafish_anatomy
def: "The Weberian apparatus consists of the modified anteriormost four vertebrae and associated structures of otophysans which transduce sound or pressure waves from the tunica externa of the swimbladder to the inner ear (Alexander, 1962)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050420-4
is_a: ZFA:0001478 ! anatomical cluster
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000317 ! axial skeleton
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001189
name: vertebrae
namespace: zebrafish_anatomy
def: "All serially repeated ossified, cartilaginous, and ligamentous elements around the notochord (Schultze and Arratia, 1988)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050420-5
is_a: ZFA:0000015 ! anatomical set
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000317 ! axial skeleton
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001190
name: Weberian vertebrae
namespace: zebrafish_anatomy
def: "The first four vertebrae, which are part of the Weberian apparatus." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050420-6
is_a: ZFA:0001189 ! vertebrae
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001188 ! Weberian apparatus
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001191
name: supraneural 2
namespace: zebrafish_anatomy
def: "Supraneural 2 is an ovoid cartilage or cartilage replacement bone located above centrum 2. It forms an immovable joint with supraneural 3 and contributes to the neural complex roofing the neural canal." [ZFIN:curator]
synonym: "sn2" RELATED []
xref: ZFIN:ZDB-ANAT-050420-7
is_a: ZFA:0001398 ! Weberian supraneural
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001363 ! neural complex
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001192
name: supraneural 3
namespace: zebrafish_anatomy
def: "Supraneural 3 is an elongated cartilage or cartilage replacement bone above vertebrae 3 and 4, developmentally fusing with NA 3 and 4. A crest or blade of membrane bone forms from its dorsal surface." [ZFIN:curator]
synonym: "sn3" RELATED []
xref: ZFIN:ZDB-ANAT-050420-8
is_a: ZFA:0001398 ! Weberian supraneural
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001363 ! neural complex
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001193
name: supraneural 8
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050420-9
is_a: ZFA:0001397 ! post-Weberian supraneural
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001194
name: cranial neural crest
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-1
relationship: end ZFS:0000028 ! Segmentation:26+ somites
relationship: part_of ZFA:0000045 ! neural crest
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001195
name: pars anterior
namespace: zebrafish_anatomy
synonym: "pars distalis" RELATED []
xref: ZFIN:ZDB-ANAT-050711-10
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001282 ! adenohypophysis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001196
name: pars tuberalis
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-11
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001282 ! adenohypophysis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001197
name: pars intermedia
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-12
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001282 ! adenohypophysis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001198
name: adenohypophyseal placode
namespace: zebrafish_anatomy
synonym: "pituitary placode" RELATED []
xref: ZFIN:ZDB-ANAT-050711-13
relationship: develops_from ZFA:0001178 ! non neural ectoderm
relationship: end ZFS:0000034 ! Hatching:Pec-fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001199
name: infundibulum
namespace: zebrafish_anatomy
def: "A short stalk connecting the pituitary with the brain. Axons of secretory cells in the floor of the diencephalon traverse the infundibulum and terminate in the neurohypophysis." [ZFIN:curator]
synonym: "hypophysial stalk" RELATED []
synonym: "infundibulum of hypothalamus" RELATED []
synonym: "pituitary stalk" RELATED []
xref: ZFIN:ZDB-ANAT-050711-14
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001200
name: corpuscles of Stannius
namespace: zebrafish_anatomy
def: "Islands of eosinic cells found on the lateroventral surface of the kidney. Function is thought to be that of the parathyroid gland in other vertebrates, which are lacking in fishes. These cells secrete hypocalcin (teleocalcin) to regulate calcium metabolism." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-15
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000529 ! kidney
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001201
name: ventral lateral mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-16
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000083 ! ventral mesoderm
relationship: start ZFS:0000021 ! Gastrula:90%-epiboly
[Term]
id: ZFA:0001202
name: optic cup
namespace: zebrafish_anatomy
synonym: "eye cup" RELATED []
xref: ZFIN:ZDB-ANAT-050711-17
relationship: develops_from ZFA:0000050 ! optic vesicle
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000107 ! eye
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001203
name: ciliary body
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-18
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001202 ! optic cup
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001204
name: axial mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-19
relationship: develops_from ZFA:0001378 ! axial hypoblast
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001205
name: Meckel's cartilage
namespace: zebrafish_anatomy
def: "Meckel's cartilage is the bilaterally paired, rod-like, cartilaginous ventral component of the lower jar, or ventral mandibular arch. It is typically resorbed in adults." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-2
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001273 ! ventral mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001206
name: intermediate mesoderm
namespace: zebrafish_anatomy
synonym: "IM" RELATED []
xref: ZFIN:ZDB-ANAT-050711-20
relationship: end ZFS:0000029 ! Pharyngula:Prim-5
relationship: part_of ZFA:0000041 ! mesoderm
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001207
name: presumptive rhombomere 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-21
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000569 ! presumptive hindbrain
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001208
name: presumptive rhombomere 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-22
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000569 ! presumptive hindbrain
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001209
name: presumptive rhombomere 7
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-23
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000569 ! presumptive hindbrain
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001210
name: presumptive rhombomere 6
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-24
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000569 ! presumptive hindbrain
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001211
name: presumptive rhombomere 5
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-25
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000569 ! presumptive hindbrain
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001212
name: presumptive rhombomere 4
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-26
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000569 ! presumptive hindbrain
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001213
name: presumptive rhombomere 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-27
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000569 ! presumptive hindbrain
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001214
name: presumptive rhombomere 8
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-28
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: part_of ZFA:0000569 ! presumptive hindbrain
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001215
name: thalamus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-29
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001216
name: pharyngeal arch skeleton
namespace: zebrafish_anatomy
def: "Regional skeletal system of the jaws, hyoid and branchial arches." [ZFIN:curator]
synonym: "pharyngeal skeleton" RELATED []
synonym: "splanchnocranium" RELATED []
xref: ZFIN:ZDB-ANAT-050711-3
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000737 ! cranial skeleton
relationship: part_of ZFA:0001306 ! pharyngeal arch
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001217
name: presumptive hypochord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-30
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000024 ! Segmentation:5-9 somites
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001218
name: presumptive floor plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-31
relationship: end ZFS:0000023 ! Segmentation:1-4 somites
relationship: part_of ZFA:0000061 ! presumptive central nervous system
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001219
name: presumptive notochord
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-32
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001220
name: copulae
namespace: zebrafish_anatomy
def: "Median cartilaginous elements that are the precursors of the basibranchials. They are not assigned to specific branchial arch numbers." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-33
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0001221
name: copula 1
namespace: zebrafish_anatomy
def: "A long slender cartilage extending along the midline from the posterior tip of the basihyal to between the third hypobranchials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-34
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001220 ! copulae
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0001222
name: copula 2
namespace: zebrafish_anatomy
def: "A cartilage extending from the posterior tip of copula 1 to the anterior tips of the fifth ceratobranchials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-35
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001220 ! copulae
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001223
name: basibranchial 1
namespace: zebrafish_anatomy
def: "Basibranchial 1 ossifies posterior to the basihyal and anterior to the first hypobranchials in copula 1 (7.6 mm) ." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-36
is_a: ZFA:0000170 ! basibranchial
relationship: develops_from ZFA:0001221 ! copula 1
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001224
name: basibranchial 2
namespace: zebrafish_anatomy
def: "Basibranchial 2 ossifies in copula 1 posterior to the first hypobranchials and anterior to the second hypobranchials (6.8 mm). It is the first of the three basibranchials to ossify." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-37
is_a: ZFA:0000170 ! basibranchial
relationship: develops_from ZFA:0001221 ! copula 1
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001225
name: basibranchial 3
namespace: zebrafish_anatomy
def: "Basibranchial 3 ossifies in copula 1 posterior to the second hypobranchials and anterior to the third hypobranchials (7.6 mm). Cartilage pads, remnants of copula 1, remain between adjacent basibranchials in the adult." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-38
is_a: ZFA:0000170 ! basibranchial
relationship: develops_from ZFA:0001221 ! copula 1
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000040 ! Larval:Days 14-20
[Term]
id: ZFA:0001226
name: basibranchial 4
namespace: zebrafish_anatomy
def: "Occasionally, a fourth basibranchial ossifies in the narrow copula 2 cartilage, which lies posterior to the third basibranchial and anterior to the anteromedial articulation of the fifth ceratobranchials." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-39
is_a: ZFA:0000170 ! basibranchial
relationship: develops_from ZFA:0001222 ! copula 2
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000041 ! Larval:Days 21-29
[Term]
id: ZFA:0001227
name: pharyngeal arch 1 skeleton
namespace: zebrafish_anatomy
def: "Skeletal and cartilagenous elements of the first pharyngeal arch." [ZFIN:curator]
synonym: "jaw cartilage" RELATED []
synonym: "jaws" RELATED []
synonym: "mandibular arch" RELATED []
synonym: "oral jaw skeleton" RELATED []
synonym: "visceral arch 1" RELATED []
xref: ZFIN:ZDB-ANAT-050711-4
is_a: ZFA:0001216 ! pharyngeal arch skeleton
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001228
name: pharyngeal arch 3 skeleton
namespace: zebrafish_anatomy
synonym: "branchial arch 1" RELATED []
synonym: "gill arch 1" RELATED []
synonym: "visceral arch 3" RELATED []
xref: ZFIN:ZDB-ANAT-050711-40
is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001229
name: pharyngeal arch 7 skeleton
namespace: zebrafish_anatomy
synonym: "branchial arch 5" RELATED []
synonym: "gill arch 5" RELATED []
synonym: "visceral arch 7" RELATED []
xref: ZFIN:ZDB-ANAT-050711-41
is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001230
name: pharyngeal arch 6 skeleton
namespace: zebrafish_anatomy
synonym: "branchial arch 4" RELATED []
synonym: "gill arch 4" RELATED []
synonym: "visceral arch 6" RELATED []
xref: ZFIN:ZDB-ANAT-050711-42
is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001231
name: pharyngeal arch 4 skeleton
namespace: zebrafish_anatomy
synonym: "branchial arch 2" RELATED []
synonym: "gill arch 2" RELATED []
synonym: "visceral arch 4" RELATED []
xref: ZFIN:ZDB-ANAT-050711-43
is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001232
name: pharyngeal arch 5 skeleton
namespace: zebrafish_anatomy
synonym: "branchial arch 3" RELATED []
synonym: "gill arch 3" RELATED []
synonym: "visceral arch 5" RELATED []
xref: ZFIN:ZDB-ANAT-050711-44
is_a: ZFA:0000095 ! pharyngeal arch 3-7 skeleton
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001233
name: hypobranchial 1
namespace: zebrafish_anatomy
def: "Hypobranchial ossifications 1-3 develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 1. The first and second hypobranchials are small and irregular in shape; one or both ossifications are absent in some adults." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-45
is_a: ZFA:0000363 ! hypobranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001234
name: hypobranchial 4
namespace: zebrafish_anatomy
def: "Tiny hypobranchial4 cartilages appear at anteromedial tips of ceratobranchial 4; these are not obviously present in mature specimens, due either to resorbtion or fusion to the cartilaginous anterior tip of ceratobranchial." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-46
is_a: ZFA:0000363 ! hypobranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001235
name: hypobranchial 3
namespace: zebrafish_anatomy
def: "Hypobranchial ossifications 1-3 develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 1. The first and second hypobranchials are small and irregular in shape; one or both ossifications are absent in some adults." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-47
is_a: ZFA:0000363 ! hypobranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001236
name: hypobranchial 2
namespace: zebrafish_anatomy
def: "Hypobranchial ossifications 1-3 develop in the small hypobranchial cartilages that lie between the medial tips of the ceratobranchials and copula 1. The first and second hypobranchials are small and irregular in shape; one or both ossifications are absent in some adults." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-48
is_a: ZFA:0000363 ! hypobranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001237
name: ceratobranchial 1
namespace: zebrafish_anatomy
def: "Anteromedially ceratobranchials 1-3 articulate with hypobranchials 1-3; medially they articulate with the cartilage between the basibranchials. Posterolaterally ceratobranchials 1-4 articulate with epibranchials 1-4. Gill rakers are present on the anterior and posterior margins of ceratobranchials 1-4." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-49
is_a: ZFA:0000488 ! ceratobranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001238
name: iris
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-5
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001202 ! optic cup
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001239
name: ceratobranchial 5
namespace: zebrafish_anatomy
def: "Ceratobranchial 5 ossifies before ceratobranchials 1-4. In the adult, ceratobranchial 5 is heavily ossified and crescent-shaped with two to three rows of posteromedially directed teeth. The anteroventral tips of ceratobranchials 5 meet medially and are ligamentously joined." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-50
is_a: ZFA:0000488 ! ceratobranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001240
name: ceratobranchial 4
namespace: zebrafish_anatomy
def: "Ceratobranchial 4 articulates with copula 2 medially. Posterolaterally ceratobranchials 1-4 articulate with epibranchials 1-4. Gill rakers are present on the anterior and posterior margins of ceratobranchials 1-4" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-51
is_a: ZFA:0000488 ! ceratobranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001241
name: ceratobranchial 3
namespace: zebrafish_anatomy
def: "Anteromedially ceratobranchials 1-3 articulate with hypobranchials 1-3; medially they articulate with the cartilage between the basibranchials. Posterolaterally ceratobranchials 1-4 articulate with epibranchials 1-4. Gill rakers are present on the anterior and posterior margins of ceratobranchials 1-4" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-52
is_a: ZFA:0000488 ! ceratobranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001242
name: ceratobranchial 2
namespace: zebrafish_anatomy
def: "Anteromedially ceratobranchials 1-3 articulate with hypobranchials 1-3; medially they articulate with the cartilage between the basibranchials. Posterolaterally ceratobranchials 1-4 articulate with epibranchials 1-4. Gill rakers are present on the anterior and posterior margins of ceratobranchials 1-4" [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-53
is_a: ZFA:0000488 ! ceratobranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001243
name: epibranchial 1
namespace: zebrafish_anatomy
def: "The narrowed medial end of epibranchial 1 articulates through cartilage with pharyngobranchial 1." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-54
is_a: ZFA:0000658 ! epibranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001244
name: epibranchial 5
namespace: zebrafish_anatomy
def: "Epibranchial 5 appears as a separate center of chondrification (6.2 mm) posterior to the lateral tip of epibranchial 4 and immediately anterior to the upper end of ceratobranchial 5. In the adult, epibranchial 5 persists as a small, cartilaginous rod extending from the cartilaginous junction of the posterodorsal tip of the uncinate process of epibranchial 4 and tip of ceratobranchial5, to the cartilaginous junction of ceratobranchial 4 and epibranchial4." [ZFIN:curator]
synonym: "interbranchial IV" RELATED []
xref: ZFIN:ZDB-ANAT-050711-55
is_a: ZFA:0000658 ! epibranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001245
name: epibranchial 4
namespace: zebrafish_anatomy
def: "The narrow end of epibranchial4 is slightly flared, and it articulates with cartilaginous pharyngobranchial4." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-56
is_a: ZFA:0000658 ! epibranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001246
name: epibranchial 2
namespace: zebrafish_anatomy
def: "The flared medial end of epibranchial 2 articulates with bifurcate lateral projections from pharyngobranchial 1." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-57
is_a: ZFA:0000658 ! epibranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001247
name: epibranchial 3
namespace: zebrafish_anatomy
def: "The flared medial end of epibranchial3 articulates with the posterolateral edge of pharyngobranchial2 + 3." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-58
is_a: ZFA:0000658 ! epibranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001248
name: pharyngobranchial 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-59
is_obsolete: true
[Term]
id: ZFA:0001249
name: exocrine pancreas
namespace: zebrafish_anatomy
def: "The exocrine pancreas is composed of acinar epithelial cells and ductal epithelium that manufacture the proteolytic enzymes and bicarbonate required for digestion." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-6
relationship: develops_from ZFA:0001369 ! anterior pancreatic bud
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000140 ! pancreas
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001250
name: pharyngobranchial 2
namespace: zebrafish_anatomy
def: "Pharyngobranchial 2 (misidentified as pharyngobranchial 1 in Cubbage and Mabee, 1993 and Mayden 1989) is present and separate from pharyngobranchial 3. It (8.0 mm) ossifies after pharyngobranchial 3. In the adult, the cartilaginous anterior end of the ossified pharyngobranchial 2 articulates with the cartilaginous medial tip of epibranchial 1. It articulates anterolaterally and posterolaterally with the anterior and posterior cartilaginous tips of epibranchial2. In Cyprinidae pb3 overlaps pb2 (Siebert, 1987; Cavender & Coburn, 1992) but does not fuse to it." [ZFIN:curator]
synonym: "infrapharyngobranchial 2" RELATED []
xref: ZFIN:ZDB-ANAT-050711-60
is_a: ZFA:0000527 ! pharyngobranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001251
name: pharyngobranchial 4
namespace: zebrafish_anatomy
synonym: "infrapharyngobranchials" RELATED []
xref: ZFIN:ZDB-ANAT-050711-61
is_a: ZFA:0000527 ! pharyngobranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001252
name: pharyngobranchial 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-62
is_a: ZFA:0000527 ! pharyngobranchial
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001253
name: pharyngobranchial 2+3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-63
is_obsolete: true
[Term]
id: ZFA:0001254
name: cranial motoneurons
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-64
is_obsolete: true
[Term]
id: ZFA:0001256
name: lateral floor plate
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-66
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000022 ! floor plate
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001257
name: medial floor plate
namespace: zebrafish_anatomy
def: "The medial portion of the spinal cord floor plate, located adjacent to the notochord." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-67
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000022 ! floor plate
relationship: start ZFS:0000024 ! Segmentation:5-9 somites
[Term]
id: ZFA:0001258
name: floor plate hindbrain
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-68
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000029 ! hindbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001259
name: forebrain ventricle
namespace: zebrafish_anatomy
synonym: "forebrain vesicle" RELATED []
synonym: "prosencephalic ventricle" RELATED []
xref: ZFIN:ZDB-ANAT-050711-69
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000109 ! forebrain
relationship: part_of ZFA:0001261 ! ventricular system
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001260
name: endocrine pancreas
namespace: zebrafish_anatomy
def: "The zebrafish endocrine pancreas is composed of small groups of islet cells that are distributed throughout the exocrine pancreas. The islet cells produce insulin, glucagon and somatostatin." [ZFIN:curator]
synonym: "pancreatic islet" RELATED []
xref: ZFIN:ZDB-ANAT-050711-7
relationship: develops_from ZFA:0001370 ! posterior pancreatic bud
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000140 ! pancreas
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001261
name: ventricular system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-70
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001262
name: gonad primordium
namespace: zebrafish_anatomy
def: "Immature reproductive tissue that has not undergone final maturation into either testis or ovary." [ZFIN:curator]
synonym: "gonadal primordium" RELATED []
synonym: "undifferentiated gonad" RELATED []
xref: ZFIN:ZDB-ANAT-050711-71
relationship: end ZFS:0000041 ! Larval:Days 21-29
relationship: part_of ZFA:0000632 ! reproductive system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001263
name: ovarian follicle stage I
namespace: zebrafish_anatomy
def: "Stage I follicles (less than 140 microns) are primary growth stage. Selman et al, 1993." [ZFIN:curator]
synonym: "previtillogenic ovarian follicle" RELATED []
xref: ZFIN:ZDB-ANAT-050711-72
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001110 ! ovarian follicle
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001264
name: ovarian follicle stage IV
namespace: zebrafish_anatomy
def: "Stage IV (690-730 microns) are oocyte maturation. Selman et al, 1993." [ZFIN:curator]
synonym: "mature ovarian follicle" RELATED []
xref: ZFIN:ZDB-ANAT-050711-73
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001110 ! ovarian follicle
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001265
name: ovarian follicle stage II
namespace: zebrafish_anatomy
def: "Stage II follicles (140-340 microns) are cortical alveolus stage. Selman et al, 1993." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-74
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001110 ! ovarian follicle
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001266
name: ovarian follicle stage III
namespace: zebrafish_anatomy
def: "Stage III (340-690 microns) are vitellogenesis. Selman et al, 1993." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-75
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001110 ! ovarian follicle
relationship: start ZFS:0000042 ! Juvenile:Days 30-44
[Term]
id: ZFA:0001267
name: cranial vasculature
namespace: zebrafish_anatomy
synonym: "head vasculature" RELATED []
xref: ZFIN:ZDB-ANAT-050711-76
is_a: ZFA:0001079 ! vasculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001268
name: sperm duct
namespace: zebrafish_anatomy
synonym: "sperm ducts" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050711-77
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000598 ! testis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001269
name: regenerating fin
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-78
is_a: ZFA:0000108 ! fin
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001270
name: blastema
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-79
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001269 ! regenerating fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001271
name: neurohypophysis
namespace: zebrafish_anatomy
synonym: "posterior pituitary" RELATED []
xref: ZFIN:ZDB-ANAT-050711-8
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000118 ! hypophysis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001272
name: dorsal mandibular arch
namespace: zebrafish_anatomy
def: "The dorsal portion of the first pharyngeal arch, comprising the upper jaw." [ZFIN:curator]
synonym: "dorsal visceral arch 2" RELATED []
synonym: "palatoquadrate arch" RELATED []
synonym: "upper jaw" RELATED []
synonym: "upper pharyngeal jaws" RELATED []
xref: ZFIN:ZDB-ANAT-050711-80
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000590 ! oral region
relationship: part_of ZFA:0001227 ! pharyngeal arch 1 skeleton
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001273
name: ventral mandibular arch
namespace: zebrafish_anatomy
def: "The ventral portion of the first pharyngeal arch, comprising the lower jaw." [ZFIN:curator]
synonym: "lower jaw" RELATED []
synonym: "mandible" RELATED []
xref: ZFIN:ZDB-ANAT-050711-81
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000590 ! oral region
relationship: part_of ZFA:0001227 ! pharyngeal arch 1 skeleton
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001274
name: coronomeckelian
namespace: zebrafish_anatomy
def: "The coronomeckelian is a membrane bone that ossifies on Meckel's cartilage where the tendon from the adductor mandibulae A3 inserts (6.1mm). In the adult, the coronomeckelian is a small, irregularly shaped bone that is fused to the dorsomedial surface of the anguloarticular, just dorsal to Meckel's cartilage." [ZFIN:curator]
synonym: "sesamoid articular" RELATED []
xref: ZFIN:ZDB-ANAT-050711-82
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000863 ! dermatocranium
relationship: part_of ZFA:0001273 ! ventral mandibular arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001275
name: mentomeckelian
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050711-83
is_obsolete: true
[Term]
id: ZFA:0001276
name: pharyngeal arch 2 skeleton
namespace: zebrafish_anatomy
synonym: "hyoid arch" RELATED []
synonym: "hyoid bars" RELATED []
synonym: "ventral visceral arch 2" RELATED []
synonym: "visceral arch 2" RELATED []
xref: ZFIN:ZDB-ANAT-050711-84
is_a: ZFA:0001216 ! pharyngeal arch skeleton
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001277
name: anterior chamber swim bladder
namespace: zebrafish_anatomy
def: "The anterior compartment of the swim bladder is thought to have acoustic resonance properties that play a key role in audition. It is connected to the posterior chamber via the dusctus communicans. Finney et al, 2006." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-3
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000076 ! swim bladder
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001278
name: posterior chamber swim bladder
namespace: zebrafish_anatomy
def: "The posterior compartment of the swim bladder plays a key role in buoyancy control. It is connected to the anterior chamber via the dusctus communicans. Finney et al, 2006." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060816-4
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000076 ! swim bladder
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001279
name: branchiostegal ray 1
namespace: zebrafish_anatomy
def: "Branchiostegal ray 1 is the most anterior ray which ossifies last (5.5 mm NL)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-87
is_a: ZFA:0000476 ! branchiostegal ray
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001280
name: branchiostegal ray 3
namespace: zebrafish_anatomy
def: "Branchiostegal ray 3 is the most posterior ray which ossifies first (3.4 mm NL)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-88
is_a: ZFA:0000476 ! branchiostegal ray
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001281
name: branchiostegal ray 2
namespace: zebrafish_anatomy
def: "Branchiostegal ray 2 is between rays 1 and 3 and ossifies second." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050711-89
is_a: ZFA:0000476 ! branchiostegal ray
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001282
name: adenohypophysis
namespace: zebrafish_anatomy
def: "The anterior lobe of the hypophysis (pituitary gland). This lobe contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin. In contrast to mamalian vertebrates, the adenohypophysis remains in a subepithelial position and there exists no equivalent of Rathke's pouch in zebrafish. Herzog et al, 2004." [ZFIN:curator]
synonym: "anterior pituitary" RELATED []
xref: ZFIN:ZDB-ANAT-050711-9
relationship: develops_from ZFA:0001198 ! adenohypophyseal placode
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000118 ! hypophysis
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001283
name: pupil
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-88
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000107 ! eye
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001284
name: optic fissure
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-89
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0001202 ! optic cup
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001285
name: intersegmental vessel
namespace: zebrafish_anatomy
synonym: "intersegmental vessels" RELATED PLURAL []
synonym: "intersomitic vessels" RELATED []
synonym: "Se" RELATED []
xref: ZFIN:ZDB-ANAT-050915-90
relationship: develops_from ZFA:0000014 ! dorsal aorta
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0005024 ! trunk vasculature
relationship: part_of ZFA:0005037 ! tail vasculature
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001286
name: caudal vein plexus
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-91
is_a: ZFA:0005037 ! tail vasculature
relationship: end ZFS:0000039 ! Larval:Days 7-13
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001287
name: renal tubule
namespace: zebrafish_anatomy
synonym: "renal tubules" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050915-92
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000529 ! kidney
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001288
name: renal glomeruli
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-93
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000529 ! kidney
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001289
name: ciliary marginal zone
namespace: zebrafish_anatomy
def: "Region at the periphery of the retina where retinal stem cells are located. After 60 hpf, the CMZ is the source of most retinal growth. Wehman et al, 2005." [ZFIN:curator]
synonym: "circumferential germinal zone" RELATED []
synonym: "CMZ" RELATED []
xref: ZFIN:ZDB-ANAT-050915-94
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000152 ! retina
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001290
name: stomodeum
namespace: zebrafish_anatomy
def: "Anterior part of the embryonic alimentary canal formed as an invagination of the ectoderm; the future mouth." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050915-95
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000112 ! gut
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0001291
name: facial ganglion
namespace: zebrafish_anatomy
synonym: "geniculate ganglion" RELATED []
synonym: "gVII" RELATED []
xref: ZFIN:ZDB-ANAT-050915-96
is_a: ZFA:0000013 ! cranial ganglia
relationship: develops_from ZFA:0001295 ! facial placode
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001292
name: epiphyseal stalk
namespace: zebrafish_anatomy
def: "The stalk emanates from the diencephalic roof at a left-of-medial position." [ZFIN:curator]
synonym: "pineal stalk" RELATED []
xref: ZFIN:ZDB-ANAT-050915-97
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001359 ! pineal complex
relationship: start ZFS:0000043 ! Juvenile:Days 45-89
[Term]
id: ZFA:0001293
name: posterior kidney
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-98
relationship: develops_from ZFA:0000151 ! pronephros
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000529 ! kidney
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001294
name: epibranchial placode
namespace: zebrafish_anatomy
synonym: "epibranchial placodes" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050915-99
is_a: ZFA:0001309 ! neurogenic placode
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000142 ! peripheral nervous system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001295
name: facial placode
namespace: zebrafish_anatomy
synonym: "geniculate placode" RELATED []
xref: ZFIN:ZDB-ANAT-050915-100
is_a: ZFA:0001294 ! epibranchial placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001296
name: glossopharyngeal placode
namespace: zebrafish_anatomy
synonym: "petrosal placode" RELATED []
xref: ZFIN:ZDB-ANAT-050915-101
is_a: ZFA:0001294 ! epibranchial placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001297
name: vagal placode 1
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-102
is_a: ZFA:0001294 ! epibranchial placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001298
name: vagal placode 2
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-103
is_a: ZFA:0001294 ! epibranchial placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001299
name: vagal placode 3
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-104
is_a: ZFA:0001294 ! epibranchial placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001300
name: vagal placode 4
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-105
is_a: ZFA:0001294 ! epibranchial placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001301
name: glossopharyngeal ganglion
namespace: zebrafish_anatomy
synonym: "gIX" RELATED []
synonym: "petrosal ganglion" RELATED []
xref: ZFIN:ZDB-ANAT-050915-106
is_a: ZFA:0000013 ! cranial ganglia
relationship: develops_from ZFA:0001296 ! glossopharyngeal placode
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001302
name: vagal ganglion 1
namespace: zebrafish_anatomy
synonym: "gX1" RELATED []
synonym: "nodose ganglion 1" RELATED []
xref: ZFIN:ZDB-ANAT-050915-107
is_a: ZFA:0000013 ! cranial ganglia
relationship: develops_from ZFA:0001297 ! vagal placode 1
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001303
name: vagal ganglion 2
namespace: zebrafish_anatomy
synonym: "gX2" RELATED []
synonym: "nodose ganglion 2" RELATED []
xref: ZFIN:ZDB-ANAT-050915-108
is_a: ZFA:0000013 ! cranial ganglia
relationship: develops_from ZFA:0001298 ! vagal placode 2
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001304
name: vagal ganglion 3
namespace: zebrafish_anatomy
synonym: "gX3" RELATED []
synonym: "nodose ganglion 3" RELATED []
xref: ZFIN:ZDB-ANAT-050915-109
is_a: ZFA:0000013 ! cranial ganglia
relationship: develops_from ZFA:0001299 ! vagal placode 3
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001305
name: vagal ganglion 4
namespace: zebrafish_anatomy
synonym: "gX4" RELATED []
synonym: "nodose ganglion 4" RELATED []
xref: ZFIN:ZDB-ANAT-050915-110
is_a: ZFA:0000013 ! cranial ganglia
relationship: develops_from ZFA:0001300 ! vagal placode 4
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001306
name: pharyngeal arch
namespace: zebrafish_anatomy
synonym: "pharyngeal arches" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050915-111
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001114 ! head
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001307
name: pharyngeal musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-112
is_a: ZFA:0000328 ! cephalic musculature
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001306 ! pharyngeal arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001308
name: cardinal organism part
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-113
is_a: ZFA:0000037 ! anatomical structure
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001094 ! whole organism
relationship: start ZFS:0000017 ! Gastrula:50%-epiboly
[Term]
id: ZFA:0001309
name: neurogenic placode
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-114
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000016 ! ectoderm
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001310
name: dorsolateral placode
namespace: zebrafish_anatomy
synonym: "dorsolateral placodes" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-050915-115
is_a: ZFA:0001309 ! neurogenic placode
relationship: end ZFS:0000000 ! Unknown
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001311
name: roof plate rhombomere
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-051116-1
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0001064 ! rhombomere
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001312
name: dorsal anterior lateral line ganglion
namespace: zebrafish_anatomy
synonym: "anterodorsal lateral line ganglion" RELATED []
xref: ZFIN:ZDB-ANAT-050915-116
is_a: ZFA:0001391 ! anterior lateral line ganglia
relationship: develops_from ZFA:0001316 ! anterior lateral line placode
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001313
name: ventral anterior lateral line ganglion
namespace: zebrafish_anatomy
synonym: "anteroventral lateral line ganglion" RELATED []
xref: ZFIN:ZDB-ANAT-050915-117
is_a: ZFA:0001391 ! anterior lateral line ganglia
relationship: develops_from ZFA:0001316 ! anterior lateral line placode
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001314
name: posterior lateral line ganglion
namespace: zebrafish_anatomy
def: "The posterior lateral line ganglion develops from a cranial ectodermal placode and contains sensory neurons that innervate the posterior lateral line system." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-050915-118
is_a: ZFA:0000120 ! lateral line ganglion
relationship: develops_from ZFA:0001156 ! posterior lateral line placode
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001315
name: atrioventricular canal
namespace: zebrafish_anatomy
synonym: "AV canal" RELATED []
xref: ZFIN:ZDB-ANAT-051116-2
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0001316
name: anterior lateral line placode
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-050915-119
is_a: ZFA:0001310 ! dorsolateral placode
relationship: end ZFS:0000031 ! Pharyngula:Prim-25
relationship: part_of ZFA:0001468 ! anterior lateral line system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001317
name: endocardial cushion
namespace: zebrafish_anatomy
def: "Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves." [ZFIN:curator]
synonym: "endocardial cushions" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-051116-3
relationship: develops_from ZFA:0005072 ! endocardial ring
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000034 ! Hatching:Pec-fin
[Term]
id: ZFA:0001318
name: cardiac jelly
namespace: zebrafish_anatomy
def: "The extracellular matrix between the myocardium and the endocardium. The cardiac jelly plays a central role in the septation of the heart and comprises most of the thickness of the heart wall at early stages, but disappears as the heart differentiates." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-051116-4
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000149 ! primitive heart tube
relationship: start ZFS:0000028 ! Segmentation:26+ somites
[Term]
id: ZFA:0001319
name: myocardium
namespace: zebrafish_anatomy
synonym: "cardiac muscle" RELATED []
xref: ZFIN:ZDB-ANAT-051116-5
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001320
name: endocardium
namespace: zebrafish_anatomy
def: "Layer that lines the lumen of the heart." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-051116-6
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000114 ! heart
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001321
name: neurocranial trabeculae
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-051116-7
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000351 ! ethmoid region
relationship: start ZFS:0000032 ! Pharyngula:High-pec
[Term]
id: ZFA:0001322
name: dorsoventral diencephalic tract
namespace: zebrafish_anatomy
def: "A tract originating in the epiphysis and fasiculating with the tract of the postoptic commissure. Ross et al, 1992." [ZFIN:curator]
synonym: "DVDT" RELATED []
xref: ZFIN:ZDB-ANAT-060131-6
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000338 ! diencephalic tracts and commissures
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001323
name: mid intestine
namespace: zebrafish_anatomy
def: "The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity. Wallace et al, 2005." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-7
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001338 ! intestine
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001324
name: enteric musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-8
is_a: ZFA:0000548 ! musculature system
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000112 ! gut
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001325
name: neural prezygopophyses
namespace: zebrafish_anatomy
def: "Paired, anteromedially directed processes from the neural arches, ligamentously joined to the postzygapophyses of the preceding vertebra." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-7
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001066 ! neural arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001326
name: lens epithelium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-9
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000035 ! lens
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001327
name: abdominal musculature
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-10
is_a: ZFA:0000473 ! body musculature
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001328
name: neuromere
namespace: zebrafish_anatomy
def: "A metameric segment of the central nervous system." [ZFIN:curator]
synonym: "neural segment" RELATED []
synonym: "neuromeres" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-11
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000012 ! central nervous system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001329
name: retinal inner plexiform layer
namespace: zebrafish_anatomy
def: "The layer within the retina where the bipolar cells synapse with the dendrites of the ganglion cells." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-051116-8
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001330
name: retinal outer plexiform layer
namespace: zebrafish_anatomy
def: "The layer within the retina where the bipolar cells synapse with the photoreceptor cells." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-051116-9
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001331
name: outer limiting membrane
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-051116-10
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000046 ! retinal neural layer
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001332
name: spinal neuromere
namespace: zebrafish_anatomy
synonym: "spinal cord segment" RELATED []
synonym: "spinal neuromeres" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-12
is_a: ZFA:0001328 ! neuromere
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000075 ! spinal cord
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001333
name: visceral organ
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-13
is_obsolete: true
[Term]
id: ZFA:0001334
name: presumptive enteric nervous system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-14
is_a: ZFA:0001116 ! presumptive structure
relationship: develops_from ZFA:0000818 ! vagal neural crest
relationship: end ZFS:0000032 ! Pharyngula:High-pec
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001335
name: supradorsal
namespace: zebrafish_anatomy
def: "Supradorsals are small paired nodules of cartilage positioned at the distal ends of neural arches and the proximal end of neural spines (Arratia et al., 2001)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-8
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001066 ! neural arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001336
name: neural spine
namespace: zebrafish_anatomy
def: "Neural spines are extensions of neural arches dorsal to the neural canal in the median skeletogenous septum. Neural spines are typically unpaired median structures but can be paired in some instances, e.g., in the abdominal region of basal teleosts such as Leptolepis, Elops, Megalops, and Hiodon)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-9
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001066 ! neural arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001337
name: spermatogonia
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-15
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000598 ! testis
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001338
name: intestine
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-16
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000112 ! gut
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001339
name: nucleus of the tract of the anterior commissure
namespace: zebrafish_anatomy
def: "Telencephalic nucleus containing the cell bodies of neurons whose axons form the anterior commissure." [ZFIN:curator]
synonym: "ntAC" RELATED []
xref: ZFIN:ZDB-ANAT-060131-17
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001108 ! anterior commissure
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001340
name: nucleus of the tract of the postoptic commissure
namespace: zebrafish_anatomy
def: "The nucleus containing the cell bodies of neurons whose axons form the postoptic commissure." [ZFIN:curator]
synonym: "ntPOC" RELATED []
xref: ZFIN:ZDB-ANAT-060131-18
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001341
name: intervening zone
namespace: zebrafish_anatomy
def: "A zone of delayed differentiation at the midbrainhindbrain boundary. The IZ separates midbrain from anterior hindbrain neuronal clusters and has been described in all vertebrates. Geling et al, 2003." [ZFIN:curator]
synonym: "IZ" RELATED []
xref: ZFIN:ZDB-ANAT-060131-19
relationship: develops_from ZFA:0001342 ! presumptive intervening zone
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001342
name: presumptive intervening zone
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-20
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0001187 ! presumptive midbrain hindbrain boundary
relationship: start ZFS:0000022 ! Gastrula:Bud
[Term]
id: ZFA:0001343
name: telencephalon diencephalon boundary
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-21
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000109 ! forebrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001344
name: zona limitans intrathalamica
namespace: zebrafish_anatomy
def: "The border between the dorsal and ventral thalamus." [ZFIN:curator]
synonym: "zli" RELATED []
xref: ZFIN:ZDB-ANAT-060131-22
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001215 ! thalamus
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001345
name: interrenal gland
namespace: zebrafish_anatomy
def: "An epithelial structure consisting of steroid producing cells interposed with chromaffin cells embedded within the head kidney. The interrenal gland is thought to be the equivalent of the mammalian adrenal cortex in zebrafish. Hsu et al. 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-23
relationship: develops_from ZFA:0001346 ! interrenal primordium
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000669 ! head kidney
relationship: start ZFS:0000035 ! Larval:Protruding-mouth
[Term]
id: ZFA:0001346
name: interrenal primordium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-24
relationship: develops_from ZFA:0001206 ! intermediate mesoderm
relationship: end ZFS:0000035 ! Larval:Protruding-mouth
relationship: part_of ZFA:0000529 ! kidney
relationship: start ZFS:0000027 ! Segmentation:20-25 somites
[Term]
id: ZFA:0001347
name: stratum fibrosum et griseum superficiale
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-25
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001348
name: stratum marginale
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-26
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001349
name: stratum opticum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-27
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001350
name: stratum griseum centrale
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-28
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001351
name: stratum album centrale
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-29
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001352
name: stratum periventriculare
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-30
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000445 ! optic tectum
relationship: start ZFS:0000038 ! Larval:Day 6
[Term]
id: ZFA:0001353
name: mesencephalic tectum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-31
relationship: develops_from ZFA:0001357 ! alar plate midbrain
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001354
name: mesencephalic tegmentum
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-32
relationship: develops_from ZFA:0000761 ! basal plate midbrain
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001355
name: primitive meninx
namespace: zebrafish_anatomy
synonym: "meninges" RELATED []
synonym: "meninx primitiva" RELATED []
xref: ZFIN:ZDB-ANAT-060131-33
relationship: develops_from ZFA:0000045 ! neural crest
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000396 ! nervous system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001356
name: terminal nerve
namespace: zebrafish_anatomy
def: "The terminal nerve, located anterior to cranial nerve I, is comprised of a group of cells with somata adjacent to the olfactory bulb and processes that extend anteriorly to the olfactory epithelium and posteriorly to the telencephalon. In teleost fish an additional group of axons extends along the optic tract and delivers putative neuromodulators to the retina. It is thought to develop from cranial neural crest. Whitlock 2004. Also see Grens, Greenwood and Fernald, Brain Behav Evol 2005; 66(1):1-9." [ZFIN:curator]
synonym: "nervus terminalis" RELATED []
xref: ZFIN:ZDB-ANAT-060131-34
is_a: ZFA:0000641 ! cranial nerve
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001357
name: alar plate midbrain
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-35
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000128 ! midbrain
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001358
name: roof plate diencephalon
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-36
relationship: end ZFS:0000043 ! Juvenile:Days 45-89
relationship: part_of ZFA:0000101 ! diencephalon
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001359
name: pineal complex
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-37
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000509 ! epithalamus
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001360
name: parapineal organ
namespace: zebrafish_anatomy
def: "An unpaired left-sided accessory organ which plays a role in establishing lateral brain left right asymmetry. Gamse et al, 2003." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-38
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001359 ! pineal complex
relationship: start ZFS:0000033 ! Hatching:Long-pec
[Term]
id: ZFA:0001361
name: basiventral
namespace: zebrafish_anatomy
def: "Basiventrals are bilaterally paired cartilages lateral to the notochord which are replaced by ossified parapophyses or hemal arches." [ZFIN:curator]
synonym: "arcualia" RELATED []
xref: ZFIN:ZDB-ANAT-060331-10
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001189 ! vertebrae
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001362
name: parapophysis
namespace: zebrafish_anatomy
def: "Parapophyses are lateral or ventrolateral projections of vertebrae to which ribs are attached in Danio rerio. Parapophyses can arise through replacement ossification of a basiventral or form directly in bone. They are separated from the centrum in basal teleosts, e.g., Leptolepis coryphaenoides, Megalops and Elops." [ZFIN:curator]
synonym: "lateral process of basiventral" RELATED []
synonym: "transverse process" RELATED []
xref: ZFIN:ZDB-ANAT-060331-11
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001361 ! basiventral
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001363
name: neural complex
namespace: zebrafish_anatomy
def: "The neural complex is the collective term for the ossified supraneurals (Sn 2 and Sn 3) and their membrane bone extensions above the first four vertebrae." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-12
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000442 ! supraneural
relationship: start ZFS:0000039 ! Larval:Days 7-13
[Term]
id: ZFA:0001364
name: hemal spine
namespace: zebrafish_anatomy
def: "Hemal spines are extensions of hemal arches in the ventral skeletogenous septum of the caudal region." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-13
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000519 ! hemal arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001365
name: trigeminal motor nuclei
namespace: zebrafish_anatomy
synonym: "motor nucleus V" RELATED []
synonym: "nV" RELATED []
xref: ZFIN:ZDB-ANAT-060131-39
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000545 ! medulla oblongata
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001366
name: tract of the postoptic commissure
namespace: zebrafish_anatomy
synonym: "TPOC" RELATED []
xref: ZFIN:ZDB-ANAT-060131-40
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000059 ! postoptic commissure
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001367
name: forebrain midbrain boundary
namespace: zebrafish_anatomy
def: "The boundary between the diencephalon and the mesencephalon." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-41
relationship: develops_from ZFA:0001368 ! presumptive forebrain midbrain boundary
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000008 ! brain
relationship: start ZFS:0000026 ! Segmentation:14-19 somites
[Term]
id: ZFA:0001368
name: presumptive forebrain midbrain boundary
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-42
relationship: end ZFS:0000025 ! Segmentation:10-13 somites
relationship: part_of ZFA:0000146 ! presumptive brain
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001369
name: anterior pancreatic bud
namespace: zebrafish_anatomy
synonym: "ventral pancreatic anlage" RELATED []
xref: ZFIN:ZDB-ANAT-060131-43
is_a: ZFA:0001390 ! pancreatic bud
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: start ZFS:0000031 ! Pharyngula:Prim-25
[Term]
id: ZFA:0001370
name: posterior pancreatic bud
namespace: zebrafish_anatomy
synonym: "dorsal pancreatic anlage" RELATED []
xref: ZFIN:ZDB-ANAT-060131-44
is_a: ZFA:0001390 ! pancreatic bud
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001371
name: pancreatic system
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-45
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000339 ! digestive system
relationship: part_of ZFA:0001158 ! endocrine system
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001372
name: pancreatic duct
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-46
relationship: develops_from ZFA:0001369 ! anterior pancreatic bud
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001371 ! pancreatic system
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001373
name: migratory slow muscle precursor cell
namespace: zebrafish_anatomy
def: "Cells that initially are located adjacent to the spinal cord and notochord along that migrate migrate from their initial medial position radially through the myotome to the lateral surface of the somites." [ZFIN:curator]
synonym: "migratory slow muscle precursor cells" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-47
relationship: develops_from ZFA:0000003 ! adaxial cell
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0000155 ! somite
relationship: start ZFS:0000023 ! Segmentation:1-4 somites
[Term]
id: ZFA:0001374
name: atrial myocardium
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-48
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000471 ! atrium
relationship: part_of ZFA:0001319 ! myocardium
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001375
name: ventriculo bulbo valve
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-49
is_a: ZFA:0005065 ! heart valve
relationship: develops_from ZFA:0001317 ! endocardial cushion
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000009 ! cardiac ventricle
relationship: part_of ZFA:0000173 ! bulbus arteriosus
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001376
name: presumptive ectoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-50
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000019 ! Gastrula:Shield
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0001377
name: presumptive mesoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-51
is_a: ZFA:0001116 ! presumptive structure
relationship: end ZFS:0000021 ! Gastrula:90%-epiboly
relationship: start ZFS:0000014 ! Blastula:Sphere
[Term]
id: ZFA:0001378
name: axial hypoblast
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-52
relationship: develops_from ZFA:0000071 ! shield
relationship: end ZFS:0000022 ! Gastrula:Bud
relationship: part_of ZFA:0000117 ! hypoblast
relationship: start ZFS:0000020 ! Gastrula:75%-epiboly
[Term]
id: ZFA:0001379
name: pharyngeal ectoderm
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-53
relationship: end ZFS:0000027 ! Segmentation:20-25 somites
relationship: part_of ZFA:0000056 ! pharynx
relationship: start ZFS:0000025 ! Segmentation:10-13 somites
[Term]
id: ZFA:0001380
name: hemal prezygopophysis
namespace: zebrafish_anatomy
def: "Hemal prezygapophyses are paired, anteromedially directed processes arising from the bases of hemal arches, ligamentously joined to the hemal postzygapophyses of the preceding vertebra. Posterior caudal vertebrae close to the caudal fin lack hemal prezygopophyses." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-14
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000519 ! hemal arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001381
name: hypohyal
namespace: zebrafish_anatomy
def: "Hypohyals are the most anterior of the bilaterally paired ventral hyoid arch elements. The two hypohyals in zebrafish ossify at the anterodorsal and anteroventral tips of the ceratohyal cartilages; no separate hypohyal cartilages are present." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-15
relationship: develops_from ZFA:0001400 ! ceratohyal cartilage
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001402 ! ventral hyoid arch
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001382
name: epibranchial uncinate process
namespace: zebrafish_anatomy
def: "Epibranchials 1-3 in adults are compound elements formed by the fusion of epibranchial cartilages and the so-called uncinate processes. Posteromedially directed uncinate processes develop on the posterior edge of epibranchials 1-3. These appear as separate centers of chondrification (6.2 mm) that later fuse laterally to the posterior edges of the epibranchial cartilages (6.8 mm)." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060331-16
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0000658 ! epibranchial
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001383
name: fin bud
namespace: zebrafish_anatomy
synonym: "fin buds" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-54
is_a: ZFA:0001105 ! embryonic structure
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: part_of ZFA:0000108 ! fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001384
name: pelvic fin bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-55
is_a: ZFA:0001383 ! fin bud
relationship: develops_from ZFA:0001454 ! pelvic fin field
relationship: end ZFS:0000030 ! Pharyngula:Prim-15
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001385
name: apical ectodermal ridge pelvic fin bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-56
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001384 ! pelvic fin bud
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001386
name: mesoderm pelvic fin bud
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-57
relationship: end ZFS:0000000 ! Unknown
relationship: part_of ZFA:0001384 ! pelvic fin bud
relationship: start ZFS:0000030 ! Pharyngula:Prim-15
[Term]
id: ZFA:0001387
name: pelvic fin skeleton
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-58
is_a: ZFA:0000027 ! paired fin skeleton
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001184 ! pelvic fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001388
name: epithelial mesenchymal boundary
namespace: zebrafish_anatomy
xref: ZFIN:ZDB-ANAT-060131-59
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001269 ! regenerating fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001389
name: regeneration epithelium
namespace: zebrafish_anatomy
synonym: "wound epithelium" RELATED []
xref: ZFIN:ZDB-ANAT-060131-60
relationship: end ZFS:0000044 ! Adult
relationship: part_of ZFA:0001269 ! regenerating fin
relationship: start ZFS:0000000 ! Unknown
[Term]
id: ZFA:0001390
name: pancreatic bud
namespace: zebrafish_anatomy
synonym: "pancreatic buds" RELATED PLURAL []
xref: ZFIN:ZDB-ANAT-060131-61
is_a: ZFA:0001105 ! embryonic structure
relationship: develops_from ZFA:0000254 ! pancreas primordium
relationship: end ZFS:0000033 ! Hatching:Long-pec
relationship: part_of ZFA:0001371 ! pancreatic system
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001391
name: anterior lateral line ganglia
namespace: zebrafish_anatomy
def: "The anteror lateral line ganglia develops from cranial ectodermal placodes and contain sensory neurons that innervate the anterior lateral line system." [ZFIN:curator]
xref: ZFIN:ZDB-ANAT-060131-62
is_a: ZFA:0000120 ! lateral line ganglion
relationship: end ZFS:0000044 ! Adult
relationship: start ZFS:0000029 ! Pharyngula:Prim-5
[Term]
id: ZFA:0001392
name: parapophysis 1
namespace: zebrafish_anatomy
def: "Lateral projections from the fir